Gene : AL3G12140 A. lyrata v2.1
Defline:  (1 of 2) PTHR10438:SF258 - THIOREDOXIN F1, CHLOROPLASTIC-RELATED Genomic Order:  204
Name:  ? AL3G12140 Secondary Identifier:  ? PAC:35942569
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G12140 0.5kb upstream 0.5kb upstream 2062   true scaffold_3: 723531-725592 Arabidopsis lyrata
AL3G12140 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 725093-725592 Arabidopsis lyrata
AL3G12140 0.5kb downstream 0.5kb downstream 2062   true scaffold_3: 723031-725092 Arabidopsis lyrata
AL3G12140 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 723031-723530 Arabidopsis lyrata
AL3G12140 1.0kb upstream 1.0kb upstream 2562   true scaffold_3: 723531-726092 Arabidopsis lyrata
AL3G12140 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 725093-726092 Arabidopsis lyrata
AL3G12140 1.0kb downstream 1.0kb downstream 2562   true scaffold_3: 722531-725092 Arabidopsis lyrata
AL3G12140 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 722531-723530 Arabidopsis lyrata
AL3G12140 2.0kb upstream 2.0kb upstream 3562   true scaffold_3: 723531-727092 Arabidopsis lyrata
AL3G12140 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 725093-727092 Arabidopsis lyrata
AL3G12140 2.0kb downstream 2.0kb downstream 3562   true scaffold_3: 721531-725092 Arabidopsis lyrata
AL3G12140 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 721531-723530 Arabidopsis lyrata
AL3G12140 5.0kb upstream 5.0kb upstream 6562   true scaffold_3: 723531-730092 Arabidopsis lyrata
AL3G12140 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 725093-730092 Arabidopsis lyrata
AL3G12140 5.0kb downstream 5.0kb downstream 6562   true scaffold_3: 718531-725092 Arabidopsis lyrata
AL3G12140 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 718531-723530 Arabidopsis lyrata
AL3G12140 10.0kb upstream 10.0kb upstream 11562   true scaffold_3: 723531-735092 Arabidopsis lyrata
AL3G12140 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 725093-735092 Arabidopsis lyrata
AL3G12140 10.0kb downstream 10.0kb downstream 11562   true scaffold_3: 713531-725092 Arabidopsis lyrata
AL3G12140 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 713531-723530 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369354 5261 Brassicaceae View MSA
123836898 5264 Brassicales-Malvales View MSA
124348522 5266 SBM View MSA
124243481 5268 Malvidae View MSA
124067919 5270 Rosid View MSA
123743661 5271 Pentapetalae View MSA
122790409 5272 Eudicot View MSA
122043508 5273 Angiosperm View MSA
121348014 5274 Embryophyte View MSA
123427200 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain