Gene : AL3G13470 A. lyrata v2.1

Defline:  (1 of 82) 1.11.1.7 - Peroxidase / Lactoperoxidase Genomic Order:  335
Name:  ? AL3G13470 Secondary Identifier:  ? PAC:35943246

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5466 Arabidopsis lyrata pathologic  
Alyrata PWY-7214 Arabidopsis lyrata pathologic  
Alyrata PWY-7445 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G13470 0.5kb upstream 0.5kb upstream 2065   true scaffold_3: 1169136-1171200 Arabidopsis lyrata
AL3G13470 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 1170701-1171200 Arabidopsis lyrata
AL3G13470 0.5kb downstream 0.5kb downstream 2065   true scaffold_3: 1168636-1170700 Arabidopsis lyrata
AL3G13470 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 1168636-1169135 Arabidopsis lyrata
AL3G13470 1.0kb upstream 1.0kb upstream 2565   true scaffold_3: 1169136-1171700 Arabidopsis lyrata
AL3G13470 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 1170701-1171700 Arabidopsis lyrata
AL3G13470 1.0kb downstream 1.0kb downstream 2565   true scaffold_3: 1168136-1170700 Arabidopsis lyrata
AL3G13470 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 1168136-1169135 Arabidopsis lyrata
AL3G13470 2.0kb upstream 2.0kb upstream 3565   true scaffold_3: 1169136-1172700 Arabidopsis lyrata
AL3G13470 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 1170701-1172700 Arabidopsis lyrata
AL3G13470 2.0kb downstream 2.0kb downstream 3565   true scaffold_3: 1167136-1170700 Arabidopsis lyrata
AL3G13470 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 1167136-1169135 Arabidopsis lyrata
AL3G13470 5.0kb upstream 5.0kb upstream 6565   true scaffold_3: 1169136-1175700 Arabidopsis lyrata
AL3G13470 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 1170701-1175700 Arabidopsis lyrata
AL3G13470 5.0kb downstream 5.0kb downstream 6565   true scaffold_3: 1164136-1170700 Arabidopsis lyrata
AL3G13470 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 1164136-1169135 Arabidopsis lyrata
AL3G13470 10.0kb upstream 10.0kb upstream 11565   true scaffold_3: 1169136-1180700 Arabidopsis lyrata
AL3G13470 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 1170701-1180700 Arabidopsis lyrata
AL3G13470 10.0kb downstream 10.0kb downstream 11565   true scaffold_3: 1159136-1170700 Arabidopsis lyrata
AL3G13470 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 1159136-1169135 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373826 5261 Brassicaceae View MSA
123836996 5264 Brassicales-Malvales View MSA
124350578 5266 SBM View MSA
124246805 5268 Malvidae View MSA
124051258 5270 Rosid View MSA
123745687 5271 Pentapetalae View MSA
122794580 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain