Gene : AL3G16320 A. lyrata v2.1
Defline:  (1 of 1) PTHR22937:SF39 - E3 UBIQUITIN-PROTEIN LIGASE TOPORS-RELATED Genomic Order:  602
Name:  ? AL3G16320 Secondary Identifier:  ? PAC:35941593
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G16320 0.5kb upstream 0.5kb upstream 4721   true scaffold_3: 2162951-2167671 Arabidopsis lyrata
AL3G16320 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 2162951-2163450 Arabidopsis lyrata
AL3G16320 0.5kb downstream 0.5kb downstream 4721   true scaffold_3: 2163451-2168171 Arabidopsis lyrata
AL3G16320 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 2167672-2168171 Arabidopsis lyrata
AL3G16320 1.0kb upstream 1.0kb upstream 5221   true scaffold_3: 2162451-2167671 Arabidopsis lyrata
AL3G16320 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 2162451-2163450 Arabidopsis lyrata
AL3G16320 1.0kb downstream 1.0kb downstream 5221   true scaffold_3: 2163451-2168671 Arabidopsis lyrata
AL3G16320 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 2167672-2168671 Arabidopsis lyrata
AL3G16320 2.0kb upstream 2.0kb upstream 6221   true scaffold_3: 2161451-2167671 Arabidopsis lyrata
AL3G16320 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 2161451-2163450 Arabidopsis lyrata
AL3G16320 2.0kb downstream 2.0kb downstream 6221   true scaffold_3: 2163451-2169671 Arabidopsis lyrata
AL3G16320 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 2167672-2169671 Arabidopsis lyrata
AL3G16320 5.0kb upstream 5.0kb upstream 9221   true scaffold_3: 2158451-2167671 Arabidopsis lyrata
AL3G16320 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 2158451-2163450 Arabidopsis lyrata
AL3G16320 5.0kb downstream 5.0kb downstream 9221   true scaffold_3: 2163451-2172671 Arabidopsis lyrata
AL3G16320 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 2167672-2172671 Arabidopsis lyrata
AL3G16320 10.0kb upstream 10.0kb upstream 14221   true scaffold_3: 2153451-2167671 Arabidopsis lyrata
AL3G16320 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 2153451-2163450 Arabidopsis lyrata
AL3G16320 10.0kb downstream 10.0kb downstream 14221   true scaffold_3: 2163451-2177671 Arabidopsis lyrata
AL3G16320 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 2167672-2177671 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363486 5261 Brassicaceae View MSA
123839264 5264 Brassicales-Malvales View MSA
124342938 5266 SBM View MSA
124251049 5268 Malvidae View MSA
124064836 5270 Rosid View MSA
123742446 5271 Pentapetalae View MSA
122794667 5272 Eudicot View MSA
122041615 5273 Angiosperm View MSA
121349825 5274 Embryophyte View MSA
123426689 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain