Gene : AL3G19050 A. lyrata v2.1

Defline:  (1 of 4) 1.1.1.8 - Glycerol-3-phosphate dehydrogenase (NAD(+)) / NADH-dihydroxyacetone phosphate reductase Genomic Order:  861
Name:  ? AL3G19050 Secondary Identifier:  ? PAC:35941054

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6118 Arabidopsis lyrata pathologic  
Alyrata PWY-7411 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G19050 0.5kb upstream 0.5kb upstream 3129   true scaffold_3: 3232655-3235783 Arabidopsis lyrata
AL3G19050 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 3232655-3233154 Arabidopsis lyrata
AL3G19050 0.5kb downstream 0.5kb downstream 3129   true scaffold_3: 3233155-3236283 Arabidopsis lyrata
AL3G19050 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 3235784-3236283 Arabidopsis lyrata
AL3G19050 1.0kb upstream 1.0kb upstream 3629   true scaffold_3: 3232155-3235783 Arabidopsis lyrata
AL3G19050 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 3232155-3233154 Arabidopsis lyrata
AL3G19050 1.0kb downstream 1.0kb downstream 3629   true scaffold_3: 3233155-3236783 Arabidopsis lyrata
AL3G19050 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 3235784-3236783 Arabidopsis lyrata
AL3G19050 2.0kb upstream 2.0kb upstream 4629   true scaffold_3: 3231155-3235783 Arabidopsis lyrata
AL3G19050 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 3231155-3233154 Arabidopsis lyrata
AL3G19050 2.0kb downstream 2.0kb downstream 4629   true scaffold_3: 3233155-3237783 Arabidopsis lyrata
AL3G19050 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 3235784-3237783 Arabidopsis lyrata
AL3G19050 5.0kb upstream 5.0kb upstream 7629   true scaffold_3: 3228155-3235783 Arabidopsis lyrata
AL3G19050 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 3228155-3233154 Arabidopsis lyrata
AL3G19050 5.0kb downstream 5.0kb downstream 7629   true scaffold_3: 3233155-3240783 Arabidopsis lyrata
AL3G19050 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 3235784-3240783 Arabidopsis lyrata
AL3G19050 10.0kb upstream 10.0kb upstream 12629   true scaffold_3: 3223155-3235783 Arabidopsis lyrata
AL3G19050 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 3223155-3233154 Arabidopsis lyrata
AL3G19050 10.0kb downstream 10.0kb downstream 12629   true scaffold_3: 3233155-3245783 Arabidopsis lyrata
AL3G19050 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 3235784-3245783 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362250 5261 Brassicaceae View MSA
123798336 5264 Brassicales-Malvales View MSA
124295989 5266 SBM View MSA
124245470 5268 Malvidae View MSA
124069658 5270 Rosid View MSA
123738520 5271 Pentapetalae View MSA
122790520 5272 Eudicot View MSA
122046820 5273 Angiosperm View MSA
121349677 5274 Embryophyte View MSA
123381397 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain