Gene : AL3G17490 A. lyrata v2.1

Defline:  (1 of 2) PTHR11157:SF13 - PROTEIN ELO-8, ISOFORM A Genomic Order:  713
Name:  ? AL3G17490 Secondary Identifier:  ? PAC:35941184

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5080 Arabidopsis lyrata pathologic  
Alyrata PWY-6433 Arabidopsis lyrata pathologic  
Alyrata PWY-6598 Arabidopsis lyrata pathologic  
Alyrata PWY-7036 Arabidopsis lyrata pathologic  
Alyrata PWY-7601 Arabidopsis lyrata pathologic  
Alyrata PWY-7619 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G17490 0.5kb upstream 0.5kb upstream 1515   true scaffold_3: 2660507-2662021 Arabidopsis lyrata
AL3G17490 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 2660507-2661006 Arabidopsis lyrata
AL3G17490 0.5kb downstream 0.5kb downstream 1515   true scaffold_3: 2661007-2662521 Arabidopsis lyrata
AL3G17490 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 2662022-2662521 Arabidopsis lyrata
AL3G17490 1.0kb upstream 1.0kb upstream 2015   true scaffold_3: 2660007-2662021 Arabidopsis lyrata
AL3G17490 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 2660007-2661006 Arabidopsis lyrata
AL3G17490 1.0kb downstream 1.0kb downstream 2015   true scaffold_3: 2661007-2663021 Arabidopsis lyrata
AL3G17490 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 2662022-2663021 Arabidopsis lyrata
AL3G17490 2.0kb upstream 2.0kb upstream 3015   true scaffold_3: 2659007-2662021 Arabidopsis lyrata
AL3G17490 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 2659007-2661006 Arabidopsis lyrata
AL3G17490 2.0kb downstream 2.0kb downstream 3015   true scaffold_3: 2661007-2664021 Arabidopsis lyrata
AL3G17490 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 2662022-2664021 Arabidopsis lyrata
AL3G17490 5.0kb upstream 5.0kb upstream 6015   true scaffold_3: 2656007-2662021 Arabidopsis lyrata
AL3G17490 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 2656007-2661006 Arabidopsis lyrata
AL3G17490 5.0kb downstream 5.0kb downstream 6015   true scaffold_3: 2661007-2667021 Arabidopsis lyrata
AL3G17490 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 2662022-2667021 Arabidopsis lyrata
AL3G17490 10.0kb upstream 10.0kb upstream 11015   true scaffold_3: 2651007-2662021 Arabidopsis lyrata
AL3G17490 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 2651007-2661006 Arabidopsis lyrata
AL3G17490 10.0kb downstream 10.0kb downstream 11015   true scaffold_3: 2661007-2672021 Arabidopsis lyrata
AL3G17490 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 2662022-2672021 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364090 5261 Brassicaceae View MSA
123833809 5264 Brassicales-Malvales View MSA
124321899 5266 SBM View MSA
124248997 5268 Malvidae View MSA
124069111 5270 Rosid View MSA
123751045 5271 Pentapetalae View MSA
122796909 5272 Eudicot View MSA
122047091 5273 Angiosperm View MSA
121347411 5274 Embryophyte View MSA
123427662 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain