Gene : AL3G17480 A. lyrata v2.1
Defline:  (1 of 1) 2.3.1.199//6.2.1.2 - Very-long-chain 3-oxoacyl-CoA synthase / Very-long-chain beta-ketoacyl-CoA synthase // Butyrate--CoA ligase / Fatty acid thiokinase (medium chain) Genomic Order:  712
Name:  ? AL3G17480 Secondary Identifier:  ? PAC:35942279
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18 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-1121 Arabidopsis lyrata pathologic  
Alyrata PWY-321 Arabidopsis lyrata pathologic  
Alyrata PWY-5080 Arabidopsis lyrata pathologic  
Alyrata PWY-5136 Arabidopsis lyrata pathologic  
Alyrata PWY-5143 Arabidopsis lyrata pathologic  
Alyrata PWY-5147 Arabidopsis lyrata pathologic  
Alyrata PWY-5156 Arabidopsis lyrata pathologic  
Alyrata PWY-561 Arabidopsis lyrata pathologic  
Alyrata PWY-5885 Arabidopsis lyrata pathologic  
Alyrata PWY-5971 Arabidopsis lyrata pathologic  
Alyrata PWY-5989 Arabidopsis lyrata pathologic  
Alyrata PWY-6433 Arabidopsis lyrata pathologic  
Alyrata PWY-6598 Arabidopsis lyrata pathologic  
Alyrata PWY-6733 Arabidopsis lyrata pathologic  
Alyrata PWY-6803 Arabidopsis lyrata pathologic  
Alyrata PWY-7036 Arabidopsis lyrata pathologic  
Alyrata PWY-7601 Arabidopsis lyrata pathologic  
Alyrata PWY-7619 Arabidopsis lyrata pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G17480 0.5kb upstream 0.5kb upstream 1569   true scaffold_3: 2658817-2660385 Arabidopsis lyrata
AL3G17480 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 2658817-2659316 Arabidopsis lyrata
AL3G17480 0.5kb downstream 0.5kb downstream 1569   true scaffold_3: 2659317-2660885 Arabidopsis lyrata
AL3G17480 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 2660386-2660885 Arabidopsis lyrata
AL3G17480 1.0kb upstream 1.0kb upstream 2069   true scaffold_3: 2658317-2660385 Arabidopsis lyrata
AL3G17480 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 2658317-2659316 Arabidopsis lyrata
AL3G17480 1.0kb downstream 1.0kb downstream 2069   true scaffold_3: 2659317-2661385 Arabidopsis lyrata
AL3G17480 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 2660386-2661385 Arabidopsis lyrata
AL3G17480 2.0kb upstream 2.0kb upstream 3069   true scaffold_3: 2657317-2660385 Arabidopsis lyrata
AL3G17480 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 2657317-2659316 Arabidopsis lyrata
AL3G17480 2.0kb downstream 2.0kb downstream 3069   true scaffold_3: 2659317-2662385 Arabidopsis lyrata
AL3G17480 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 2660386-2662385 Arabidopsis lyrata
AL3G17480 5.0kb upstream 5.0kb upstream 6069   true scaffold_3: 2654317-2660385 Arabidopsis lyrata
AL3G17480 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 2654317-2659316 Arabidopsis lyrata
AL3G17480 5.0kb downstream 5.0kb downstream 6069   true scaffold_3: 2659317-2665385 Arabidopsis lyrata
AL3G17480 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 2660386-2665385 Arabidopsis lyrata
AL3G17480 10.0kb upstream 10.0kb upstream 11069   true scaffold_3: 2649317-2660385 Arabidopsis lyrata
AL3G17480 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 2649317-2659316 Arabidopsis lyrata
AL3G17480 10.0kb downstream 10.0kb downstream 11069   true scaffold_3: 2659317-2670385 Arabidopsis lyrata
AL3G17480 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 2660386-2670385 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343503 5261 Brassicaceae View MSA
123783684 5264 Brassicales-Malvales View MSA
124281902 5266 SBM View MSA
124136578 5268 Malvidae View MSA
123864417 5270 Rosid View MSA
123751045 5271 Pentapetalae View MSA
122796909 5272 Eudicot View MSA
122047091 5273 Angiosperm View MSA
121347411 5274 Embryophyte View MSA
123427662 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain