Gene : AL3G17360 A. lyrata v2.1

Defline:  (1 of 2) PTHR12506:SF27 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 34-RELATED Genomic Order:  701
Name:  ? AL3G17360 Secondary Identifier:  ? PAC:35942479

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G17360 0.5kb upstream 0.5kb upstream 2999   true scaffold_3: 2571190-2574188 Arabidopsis lyrata
AL3G17360 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 2573689-2574188 Arabidopsis lyrata
AL3G17360 0.5kb downstream 0.5kb downstream 2999   true scaffold_3: 2570690-2573688 Arabidopsis lyrata
AL3G17360 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 2570690-2571189 Arabidopsis lyrata
AL3G17360 1.0kb upstream 1.0kb upstream 3499   true scaffold_3: 2571190-2574688 Arabidopsis lyrata
AL3G17360 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 2573689-2574688 Arabidopsis lyrata
AL3G17360 1.0kb downstream 1.0kb downstream 3499   true scaffold_3: 2570190-2573688 Arabidopsis lyrata
AL3G17360 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 2570190-2571189 Arabidopsis lyrata
AL3G17360 2.0kb upstream 2.0kb upstream 4499   true scaffold_3: 2571190-2575688 Arabidopsis lyrata
AL3G17360 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 2573689-2575688 Arabidopsis lyrata
AL3G17360 2.0kb downstream 2.0kb downstream 4499   true scaffold_3: 2569190-2573688 Arabidopsis lyrata
AL3G17360 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 2569190-2571189 Arabidopsis lyrata
AL3G17360 5.0kb upstream 5.0kb upstream 7499   true scaffold_3: 2571190-2578688 Arabidopsis lyrata
AL3G17360 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 2573689-2578688 Arabidopsis lyrata
AL3G17360 5.0kb downstream 5.0kb downstream 7499   true scaffold_3: 2566190-2573688 Arabidopsis lyrata
AL3G17360 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 2566190-2571189 Arabidopsis lyrata
AL3G17360 10.0kb upstream 10.0kb upstream 12499   true scaffold_3: 2571190-2583688 Arabidopsis lyrata
AL3G17360 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 2573689-2583688 Arabidopsis lyrata
AL3G17360 10.0kb downstream 10.0kb downstream 12499   true scaffold_3: 2561190-2573688 Arabidopsis lyrata
AL3G17360 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 2561190-2571189 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372213 5261 Brassicaceae View MSA
123836159 5264 Brassicales-Malvales View MSA
124338324 5266 SBM View MSA
124244346 5268 Malvidae View MSA
124065869 5270 Rosid View MSA
123744016 5271 Pentapetalae View MSA
122797715 5272 Eudicot View MSA
122047734 5273 Angiosperm View MSA
121348027 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain