Gene : AL3G20630 A. lyrata v2.1

Defline:  (1 of 1) PTHR30509:SF9 - F3L24.34 PROTEIN Genomic Order:  1012
Name:  ? AL3G20630 Secondary Identifier:  ? PAC:35941046

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G20630 0.5kb upstream 0.5kb upstream 3244   true scaffold_3: 3757134-3760377 Arabidopsis lyrata
AL3G20630 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 3757134-3757633 Arabidopsis lyrata
AL3G20630 0.5kb downstream 0.5kb downstream 3244   true scaffold_3: 3757634-3760877 Arabidopsis lyrata
AL3G20630 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 3760378-3760877 Arabidopsis lyrata
AL3G20630 1.0kb upstream 1.0kb upstream 3744   true scaffold_3: 3756634-3760377 Arabidopsis lyrata
AL3G20630 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 3756634-3757633 Arabidopsis lyrata
AL3G20630 1.0kb downstream 1.0kb downstream 3744   true scaffold_3: 3757634-3761377 Arabidopsis lyrata
AL3G20630 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 3760378-3761377 Arabidopsis lyrata
AL3G20630 2.0kb upstream 2.0kb upstream 4744   true scaffold_3: 3755634-3760377 Arabidopsis lyrata
AL3G20630 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 3755634-3757633 Arabidopsis lyrata
AL3G20630 2.0kb downstream 2.0kb downstream 4744   true scaffold_3: 3757634-3762377 Arabidopsis lyrata
AL3G20630 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 3760378-3762377 Arabidopsis lyrata
AL3G20630 5.0kb upstream 5.0kb upstream 7744   true scaffold_3: 3752634-3760377 Arabidopsis lyrata
AL3G20630 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 3752634-3757633 Arabidopsis lyrata
AL3G20630 5.0kb downstream 5.0kb downstream 7744   true scaffold_3: 3757634-3765377 Arabidopsis lyrata
AL3G20630 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 3760378-3765377 Arabidopsis lyrata
AL3G20630 10.0kb upstream 10.0kb upstream 12744   true scaffold_3: 3747634-3760377 Arabidopsis lyrata
AL3G20630 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 3747634-3757633 Arabidopsis lyrata
AL3G20630 10.0kb downstream 10.0kb downstream 12744   true scaffold_3: 3757634-3770377 Arabidopsis lyrata
AL3G20630 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 3760378-3770377 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360896 5261 Brassicaceae View MSA
123798054 5264 Brassicales-Malvales View MSA
124295736 5266 SBM View MSA
124248712 5268 Malvidae View MSA
124069807 5270 Rosid View MSA
123743280 5271 Pentapetalae View MSA
122770592 5272 Eudicot View MSA
122049763 5273 Angiosperm View MSA
121311579 5274 Embryophyte View MSA
123426267 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain