Gene : AL3G19820 A. lyrata v2.1
Defline:  (1 of 59) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  935
Name:  ? AL3G19820 Secondary Identifier:  ? PAC:35941176
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G19820 0.5kb upstream 0.5kb upstream 2562   true scaffold_3: 3477258-3479819 Arabidopsis lyrata
AL3G19820 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 3479320-3479819 Arabidopsis lyrata
AL3G19820 0.5kb downstream 0.5kb downstream 2562   true scaffold_3: 3476758-3479319 Arabidopsis lyrata
AL3G19820 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 3476758-3477257 Arabidopsis lyrata
AL3G19820 1.0kb upstream 1.0kb upstream 3062   true scaffold_3: 3477258-3480319 Arabidopsis lyrata
AL3G19820 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 3479320-3480319 Arabidopsis lyrata
AL3G19820 1.0kb downstream 1.0kb downstream 3062   true scaffold_3: 3476258-3479319 Arabidopsis lyrata
AL3G19820 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 3476258-3477257 Arabidopsis lyrata
AL3G19820 2.0kb upstream 2.0kb upstream 4062   true scaffold_3: 3477258-3481319 Arabidopsis lyrata
AL3G19820 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 3479320-3481319 Arabidopsis lyrata
AL3G19820 2.0kb downstream 2.0kb downstream 4062   true scaffold_3: 3475258-3479319 Arabidopsis lyrata
AL3G19820 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 3475258-3477257 Arabidopsis lyrata
AL3G19820 5.0kb upstream 5.0kb upstream 7062   true scaffold_3: 3477258-3484319 Arabidopsis lyrata
AL3G19820 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 3479320-3484319 Arabidopsis lyrata
AL3G19820 5.0kb downstream 5.0kb downstream 7062   true scaffold_3: 3472258-3479319 Arabidopsis lyrata
AL3G19820 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 3472258-3477257 Arabidopsis lyrata
AL3G19820 10.0kb upstream 10.0kb upstream 12062   true scaffold_3: 3477258-3489319 Arabidopsis lyrata
AL3G19820 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 3479320-3489319 Arabidopsis lyrata
AL3G19820 10.0kb downstream 10.0kb downstream 12062   true scaffold_3: 3467258-3479319 Arabidopsis lyrata
AL3G19820 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 3467258-3477257 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361721 5261 Brassicaceae View MSA
123828942 5264 Brassicales-Malvales View MSA
124338657 5266 SBM View MSA
124243845 5268 Malvidae View MSA
124072628 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain