Protein Family : Tetratricopeptide repeat (TPR)-like superfamily protein 124243845

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  46

46 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29765.t000023 (1 of 249) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) R. communis v0.1 2449   29765: 214670-217118
29811.t000014 (1 of 249) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) R. communis v0.1 2169   29811: 181973-184141
29820.t000057 (1 of 451) PF13041 - PPR repeat family (PPR_2) R. communis v0.1 2320   29820: 334313-336632
orange1.1g044872m.g (1 of 63) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) C. sinensis v1.1 1815   scaffold00042: 718430-720244
orange1.1g005487m.g (1 of 187) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) C. sinensis v1.1 2085   scaffold00408: 124284-126368
AT5G27110 (1 of 185) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) A. thaliana TAIR10 2076   Chr5: 9538572-9540647
AT3G08820 (1 of 61) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) A. thaliana TAIR10 2062   Chr3: 2677118-2679179
AT3G16610 (1 of 185) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) A. thaliana TAIR10 1965   Chr3: 5656371-5658335
Thhalv10022175m.g (1 of 176) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) E. salsugineum v1.0 1968   scaffold_13: 3699430-3701397
Thhalv10002816m.g (1 of 59) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) E. salsugineum v1.0 2058   scaffold_4: 3670271-3672328
Thhalv10005537m.g (1 of 176) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) E. salsugineum v1.0 2088   scaffold_6: 4315189-4317276
Ciclev10011209m.g (1 of 66) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) C. clementina v1.0 2101   scaffold_6: 17143869-17145969
Ciclev10014446m.g (1 of 186) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) C. clementina v1.0 3847   scaffold_2: 7719550-7723396
Lus10029436.g (1 of 70) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) L. usitatissimum v1.0 2067   scaffold360: 1130712-1132778
Lus10035788.g (1 of 70) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) L. usitatissimum v1.0 2385   scaffold464: 1355114-1357498
Lus10036029.g (1 of 308) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) L. usitatissimum v1.0 1512   scaffold76: 778748-780259
Gorai.004G014500 (1 of 211) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) G. raimondii v2.1 2100   Chr04: 1025171-1027270
Thecc1EG043921 (1 of 82) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) T. cacao v1.1 9173   scaffold_10r: 11101008-11110180
Thecc1EG040952 (1 of 191) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) T. cacao v1.1 3184   scaffold_9: 34540144-34543327
Araha.25299s0011 (1 of 50) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) A. halleri v1.1 2058   Scaffold25299: 31460-33517
Araha.32949s0001 (1 of 160) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) A. halleri v1.1 1914   Scaffold32949: 2-1915
Cagra.1917s0005 (1 of 168) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) C. grandiflora v1.1 1965   Scaffold1917: 19313-21277
Cagra.2991s0011 (1 of 54) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) C. grandiflora v1.1 2206   Scaffold2991: 44860-47065
Cagra.6165s0003 (1 of 168) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) C. grandiflora v1.1 2079   Scaffold6165: 8372-10450
Brara.F02882 (1 of 191) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) B. rapa FPsc v1.3 2048   A06: 23430090-23432137
Brara.A03053 (1 of 191) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) B. rapa FPsc v1.3 1971   A01: 25909101-25911071
Brara.E03135 (1 of 52) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) B. rapa FPsc v1.3 2055   A05: 25787815-25789869
Bostr.28625s0031 (1 of 182) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) B. stricta v1.2 1965   Scaffold28625: 223007-224971
Bostr.29827s0023 (1 of 182) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) B. stricta v1.2 2073   Scaffold29827: 421010-423082
Bostr.22252s0191 (1 of 57) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) B. stricta v1.2 2241   Scaffold22252: 880129-882369

46 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29765.m000741 R. communis v0.1 124243845 Tetratricopeptide repeat (TPR)-like superfamily protein 3 5268 Malvidae
29811.m000535 R. communis v0.1 124243845 Tetratricopeptide repeat (TPR)-like superfamily protein 3 5268 Malvidae
orange1.1g044872m C. sinensis v1.1 124243845 Tetratricopeptide repeat (TPR)-like superfamily protein 2 5268 Malvidae
Ciclev10011209m C. clementina v1.0 124243845 Tetratricopeptide repeat (TPR)-like superfamily protein 2 5268 Malvidae
Lus10029436 L. usitatissimum v1.0 124243845 Tetratricopeptide repeat (TPR)-like superfamily protein 3 5268 Malvidae
Lus10036029 L. usitatissimum v1.0 124243845 Tetratricopeptide repeat (TPR)-like superfamily protein 3 5268 Malvidae
Brara.E03135.1.p B. rapa FPsc v1.3 124243845 Tetratricopeptide repeat (TPR)-like superfamily protein 3 5268 Malvidae
Brara.F02882.1.p B. rapa FPsc v1.3 124243845 Tetratricopeptide repeat (TPR)-like superfamily protein 3 5268 Malvidae
SapurV1A.0001s0180.1.p S. purpurea v1.0 124243845 Tetratricopeptide repeat (TPR)-like superfamily protein 3 5268 Malvidae
Manes.10G117500.1.p M. esculenta v6.1 124243845 Tetratricopeptide repeat (TPR)-like superfamily protein 2 5268 Malvidae
AL6G40060.t1 A. lyrata v2.1 124243845 Tetratricopeptide repeat (TPR)-like superfamily protein 3 5268 Malvidae
Potri.003G006800.1.p P. trichocarpa v3.1 124243845 Tetratricopeptide repeat (TPR)-like superfamily protein 3 5268 Malvidae
Potri.006G105700.1.p P. trichocarpa v3.1 124243845 Tetratricopeptide repeat (TPR)-like superfamily protein 3 5268 Malvidae
29820.m001036 R. communis v0.1 124243845 Tetratricopeptide repeat (TPR)-like superfamily protein 3 5268 Malvidae
orange1.1g005487m C. sinensis v1.1 124243845 Tetratricopeptide repeat (TPR)-like superfamily protein 2 5268 Malvidae
AT3G16610.1 A. thaliana TAIR10 124243845 Tetratricopeptide repeat (TPR)-like superfamily protein 3 5268 Malvidae
AT3G08820.1 A. thaliana TAIR10 124243845 Tetratricopeptide repeat (TPR)-like superfamily protein 3 5268 Malvidae
AT5G27110.1 A. thaliana TAIR10 124243845 Tetratricopeptide repeat (TPR)-like superfamily protein 3 5268 Malvidae
Thhalv10005537m E. salsugineum v1.0 124243845 Tetratricopeptide repeat (TPR)-like superfamily protein 3 5268 Malvidae
Thhalv10022175m E. salsugineum v1.0 124243845 Tetratricopeptide repeat (TPR)-like superfamily protein 3 5268 Malvidae
Thhalv10002816m E. salsugineum v1.0 124243845 Tetratricopeptide repeat (TPR)-like superfamily protein 3 5268 Malvidae
Ciclev10014446m C. clementina v1.0 124243845 Tetratricopeptide repeat (TPR)-like superfamily protein 2 5268 Malvidae
Lus10035788 L. usitatissimum v1.0 124243845 Tetratricopeptide repeat (TPR)-like superfamily protein 3 5268 Malvidae
Gorai.004G014500.1 G. raimondii v2.1 124243845 Tetratricopeptide repeat (TPR)-like superfamily protein 1 5268 Malvidae
Thecc1EG040952t1 T. cacao v1.1 124243845 Tetratricopeptide repeat (TPR)-like superfamily protein 2 5268 Malvidae
Thecc1EG043921t2 T. cacao v1.1 124243845 Tetratricopeptide repeat (TPR)-like superfamily protein 2 5268 Malvidae
Araha.25299s0011.1.p A. halleri v1.1 124243845 Tetratricopeptide repeat (TPR)-like superfamily protein 2 5268 Malvidae
Araha.32949s0001.1.p A. halleri v1.1 124243845 Tetratricopeptide repeat (TPR)-like superfamily protein 2 5268 Malvidae
Cagra.2991s0011.1.p C. grandiflora v1.1 124243845 Tetratricopeptide repeat (TPR)-like superfamily protein 3 5268 Malvidae
Cagra.1917s0005.1.p C. grandiflora v1.1 124243845 Tetratricopeptide repeat (TPR)-like superfamily protein 3 5268 Malvidae