Gene : Cagra.2991s0011 C. grandiflora v1.1
Defline:  (1 of 54) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  11
Name:  ? Cagra.2991s0011 Secondary Identifier:  ? PAC:28900200
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.2991s0011 0.5kb upstream 0.5kb upstream 2706 true Scaffold2991: 44360-47065 Capsella grandiflora
Cagra.2991s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold2991: 44360-44859 Capsella grandiflora
Cagra.2991s0011 0.5kb downstream 0.5kb downstream 2706 true Scaffold2991: 44860-47565 Capsella grandiflora
Cagra.2991s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold2991: 47066-47565 Capsella grandiflora
Cagra.2991s0011 1.0kb upstream 1.0kb upstream 3206 true Scaffold2991: 43860-47065 Capsella grandiflora
Cagra.2991s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold2991: 43860-44859 Capsella grandiflora
Cagra.2991s0011 1.0kb downstream 1.0kb downstream 3206 true Scaffold2991: 44860-48065 Capsella grandiflora
Cagra.2991s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold2991: 47066-48065 Capsella grandiflora
Cagra.2991s0011 2.0kb upstream 2.0kb upstream 4206 true Scaffold2991: 42860-47065 Capsella grandiflora
Cagra.2991s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold2991: 42860-44859 Capsella grandiflora
Cagra.2991s0011 2.0kb downstream 2.0kb downstream 4206 true Scaffold2991: 44860-49065 Capsella grandiflora
Cagra.2991s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold2991: 47066-49065 Capsella grandiflora
Cagra.2991s0011 5.0kb upstream 5.0kb upstream 7206 true Scaffold2991: 39860-47065 Capsella grandiflora
Cagra.2991s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold2991: 39860-44859 Capsella grandiflora
Cagra.2991s0011 5.0kb downstream 5.0kb downstream 7206 true Scaffold2991: 44860-52065 Capsella grandiflora
Cagra.2991s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold2991: 47066-52065 Capsella grandiflora
Cagra.2991s0011 10.0kb upstream 10.0kb upstream 12206 true Scaffold2991: 34860-47065 Capsella grandiflora
Cagra.2991s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold2991: 34860-44859 Capsella grandiflora
Cagra.2991s0011 10.0kb downstream 10.0kb downstream 12206 true Scaffold2991: 44860-57065 Capsella grandiflora
Cagra.2991s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold2991: 47066-57065 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361721 5261 Brassicaceae View MSA
123828942 5264 Brassicales-Malvales View MSA
124338657 5266 SBM View MSA
124243845 5268 Malvidae View MSA
124072628 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain