Gene : Thecc1EG040952 T. cacao v1.1
Defline:  (1 of 191) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  2469
Name:  ? Thecc1EG040952 Secondary Identifier:  ? PAC:27428214
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG040952 0.5kb upstream 0.5kb upstream 3684 true scaffold_9: 34539644-34543327 Theobroma cacao
Thecc1EG040952 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 34539644-34540143 Theobroma cacao
Thecc1EG040952 0.5kb downstream 0.5kb downstream 3684 true scaffold_9: 34540144-34543827 Theobroma cacao
Thecc1EG040952 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 34543328-34543827 Theobroma cacao
Thecc1EG040952 1.0kb upstream 1.0kb upstream 4184 true scaffold_9: 34539144-34543327 Theobroma cacao
Thecc1EG040952 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 34539144-34540143 Theobroma cacao
Thecc1EG040952 1.0kb downstream 1.0kb downstream 4184 true scaffold_9: 34540144-34544327 Theobroma cacao
Thecc1EG040952 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 34543328-34544327 Theobroma cacao
Thecc1EG040952 2.0kb upstream 2.0kb upstream 5184 true scaffold_9: 34538144-34543327 Theobroma cacao
Thecc1EG040952 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 34538144-34540143 Theobroma cacao
Thecc1EG040952 2.0kb downstream 2.0kb downstream 5184 true scaffold_9: 34540144-34545327 Theobroma cacao
Thecc1EG040952 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 34543328-34545327 Theobroma cacao
Thecc1EG040952 5.0kb upstream 5.0kb upstream 8184 true scaffold_9: 34535144-34543327 Theobroma cacao
Thecc1EG040952 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 34535144-34540143 Theobroma cacao
Thecc1EG040952 5.0kb downstream 5.0kb downstream 8184 true scaffold_9: 34540144-34548327 Theobroma cacao
Thecc1EG040952 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 34543328-34548327 Theobroma cacao
Thecc1EG040952 10.0kb upstream 10.0kb upstream 13184 true scaffold_9: 34530144-34543327 Theobroma cacao
Thecc1EG040952 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 34530144-34540143 Theobroma cacao
Thecc1EG040952 10.0kb downstream 10.0kb downstream 13184 true scaffold_9: 34540144-34553327 Theobroma cacao
Thecc1EG040952 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 34543328-34553327 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827605 5264 Brassicales-Malvales View MSA
124343196 5266 SBM View MSA
124243845 5268 Malvidae View MSA
124072628 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain