Gene : AL3G23490 A. lyrata v2.1

Defline:  (1 of 2) K11838 - ubiquitin carboxyl-terminal hydrolase 7 (USP7, UBP15) Genomic Order:  1278
Name:  ? AL3G23490 Secondary Identifier:  ? PAC:35940474

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G23490 0.5kb upstream 0.5kb upstream 9641   true scaffold_3: 4790768-4800408 Arabidopsis lyrata
AL3G23490 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 4799909-4800408 Arabidopsis lyrata
AL3G23490 0.5kb downstream 0.5kb downstream 9641   true scaffold_3: 4790268-4799908 Arabidopsis lyrata
AL3G23490 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 4790268-4790767 Arabidopsis lyrata
AL3G23490 1.0kb upstream 1.0kb upstream 10141   true scaffold_3: 4790768-4800908 Arabidopsis lyrata
AL3G23490 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 4799909-4800908 Arabidopsis lyrata
AL3G23490 1.0kb downstream 1.0kb downstream 10141   true scaffold_3: 4789768-4799908 Arabidopsis lyrata
AL3G23490 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 4789768-4790767 Arabidopsis lyrata
AL3G23490 2.0kb upstream 2.0kb upstream 11141   true scaffold_3: 4790768-4801908 Arabidopsis lyrata
AL3G23490 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 4799909-4801908 Arabidopsis lyrata
AL3G23490 2.0kb downstream 2.0kb downstream 11141   true scaffold_3: 4788768-4799908 Arabidopsis lyrata
AL3G23490 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 4788768-4790767 Arabidopsis lyrata
AL3G23490 5.0kb upstream 5.0kb upstream 14141   true scaffold_3: 4790768-4804908 Arabidopsis lyrata
AL3G23490 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 4799909-4804908 Arabidopsis lyrata
AL3G23490 5.0kb downstream 5.0kb downstream 14141   true scaffold_3: 4785768-4799908 Arabidopsis lyrata
AL3G23490 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 4785768-4790767 Arabidopsis lyrata
AL3G23490 10.0kb upstream 10.0kb upstream 19141   true scaffold_3: 4790768-4809908 Arabidopsis lyrata
AL3G23490 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 4799909-4809908 Arabidopsis lyrata
AL3G23490 10.0kb downstream 10.0kb downstream 19141   true scaffold_3: 4780768-4799908 Arabidopsis lyrata
AL3G23490 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 4780768-4790767 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369567 5261 Brassicaceae View MSA
123841260 5264 Brassicales-Malvales View MSA
124343034 5266 SBM View MSA
124243207 5268 Malvidae View MSA
124072091 5270 Rosid View MSA
123746914 5271 Pentapetalae View MSA
122788764 5272 Eudicot View MSA
122042201 5273 Angiosperm View MSA
121346231 5274 Embryophyte View MSA
123427549 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain