Gene : AL3G22520 A. lyrata v2.1

Defline:  (1 of 2) PF11204 - Protein of unknown function (DUF2985) (DUF2985) Genomic Order:  1188
Name:  ? AL3G22520 Secondary Identifier:  ? PAC:35941279

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G22520 0.5kb upstream 0.5kb upstream 2915   true scaffold_3: 4406862-4409776 Arabidopsis lyrata
AL3G22520 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 4406862-4407361 Arabidopsis lyrata
AL3G22520 0.5kb downstream 0.5kb downstream 2915   true scaffold_3: 4407362-4410276 Arabidopsis lyrata
AL3G22520 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 4409777-4410276 Arabidopsis lyrata
AL3G22520 1.0kb upstream 1.0kb upstream 3415   true scaffold_3: 4406362-4409776 Arabidopsis lyrata
AL3G22520 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 4406362-4407361 Arabidopsis lyrata
AL3G22520 1.0kb downstream 1.0kb downstream 3415   true scaffold_3: 4407362-4410776 Arabidopsis lyrata
AL3G22520 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 4409777-4410776 Arabidopsis lyrata
AL3G22520 2.0kb upstream 2.0kb upstream 4415   true scaffold_3: 4405362-4409776 Arabidopsis lyrata
AL3G22520 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 4405362-4407361 Arabidopsis lyrata
AL3G22520 2.0kb downstream 2.0kb downstream 4415   true scaffold_3: 4407362-4411776 Arabidopsis lyrata
AL3G22520 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 4409777-4411776 Arabidopsis lyrata
AL3G22520 5.0kb upstream 5.0kb upstream 7415   true scaffold_3: 4402362-4409776 Arabidopsis lyrata
AL3G22520 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 4402362-4407361 Arabidopsis lyrata
AL3G22520 5.0kb downstream 5.0kb downstream 7415   true scaffold_3: 4407362-4414776 Arabidopsis lyrata
AL3G22520 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 4409777-4414776 Arabidopsis lyrata
AL3G22520 10.0kb upstream 10.0kb upstream 12415   true scaffold_3: 4397362-4409776 Arabidopsis lyrata
AL3G22520 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 4397362-4407361 Arabidopsis lyrata
AL3G22520 10.0kb downstream 10.0kb downstream 12415   true scaffold_3: 4407362-4419776 Arabidopsis lyrata
AL3G22520 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 4409777-4419776 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381538 5261 Brassicaceae View MSA
123834088 5264 Brassicales-Malvales View MSA
124343175 5266 SBM View MSA
124239250 5268 Malvidae View MSA
124061942 5270 Rosid View MSA
123744852 5271 Pentapetalae View MSA
122790012 5272 Eudicot View MSA
122046321 5273 Angiosperm View MSA
121349634 5274 Embryophyte View MSA
123381382 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain