Gene : AL3G26110 A. lyrata v2.1

Defline:  (1 of 2) PTHR23151//PTHR23151:SF59 - DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1530
Name:  ? AL3G26110 Secondary Identifier:  ? PAC:35942059

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5173 Arabidopsis lyrata pathologic  
Alyrata PWY-5464 Arabidopsis lyrata pathologic  
Alyrata PYRUVDEHYD-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G26110 0.5kb upstream 0.5kb upstream 5248   true scaffold_3: 5737471-5742718 Arabidopsis lyrata
AL3G26110 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 5737471-5737970 Arabidopsis lyrata
AL3G26110 0.5kb downstream 0.5kb downstream 5248   true scaffold_3: 5737971-5743218 Arabidopsis lyrata
AL3G26110 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 5742719-5743218 Arabidopsis lyrata
AL3G26110 1.0kb upstream 1.0kb upstream 5748   true scaffold_3: 5736971-5742718 Arabidopsis lyrata
AL3G26110 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 5736971-5737970 Arabidopsis lyrata
AL3G26110 1.0kb downstream 1.0kb downstream 5748   true scaffold_3: 5737971-5743718 Arabidopsis lyrata
AL3G26110 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 5742719-5743718 Arabidopsis lyrata
AL3G26110 2.0kb upstream 2.0kb upstream 6748   true scaffold_3: 5735971-5742718 Arabidopsis lyrata
AL3G26110 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 5735971-5737970 Arabidopsis lyrata
AL3G26110 2.0kb downstream 2.0kb downstream 6748   true scaffold_3: 5737971-5744718 Arabidopsis lyrata
AL3G26110 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 5742719-5744718 Arabidopsis lyrata
AL3G26110 5.0kb upstream 5.0kb upstream 9748   true scaffold_3: 5732971-5742718 Arabidopsis lyrata
AL3G26110 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 5732971-5737970 Arabidopsis lyrata
AL3G26110 5.0kb downstream 5.0kb downstream 9748   true scaffold_3: 5737971-5747718 Arabidopsis lyrata
AL3G26110 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 5742719-5747718 Arabidopsis lyrata
AL3G26110 10.0kb upstream 10.0kb upstream 14748   true scaffold_3: 5727971-5742718 Arabidopsis lyrata
AL3G26110 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 5727971-5737970 Arabidopsis lyrata
AL3G26110 10.0kb downstream 10.0kb downstream 14748   true scaffold_3: 5737971-5752718 Arabidopsis lyrata
AL3G26110 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 5742719-5752718 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366332 5261 Brassicaceae View MSA
123835606 5264 Brassicales-Malvales View MSA
124344538 5266 SBM View MSA
124243608 5268 Malvidae View MSA
124061053 5270 Rosid View MSA
123739083 5271 Pentapetalae View MSA
122788575 5272 Eudicot View MSA
122043289 5273 Angiosperm View MSA
121343868 5274 Embryophyte View MSA
123426306 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain