Gene : AL3G27080 A. lyrata v2.1
Defline:  (1 of 1) PTHR10791//PTHR10791:SF57 - RAG1-ACTIVATING PROTEIN 1 // SUBFAMILY NOT NAMED Genomic Order:  1625
Name:  ? AL3G27080 Secondary Identifier:  ? PAC:35943459
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G27080 0.5kb upstream 0.5kb upstream 2498   true scaffold_3: 6162060-6164557 Arabidopsis lyrata
AL3G27080 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 6164058-6164557 Arabidopsis lyrata
AL3G27080 0.5kb downstream 0.5kb downstream 2498   true scaffold_3: 6161560-6164057 Arabidopsis lyrata
AL3G27080 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 6161560-6162059 Arabidopsis lyrata
AL3G27080 1.0kb upstream 1.0kb upstream 2998   true scaffold_3: 6162060-6165057 Arabidopsis lyrata
AL3G27080 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 6164058-6165057 Arabidopsis lyrata
AL3G27080 1.0kb downstream 1.0kb downstream 2998   true scaffold_3: 6161060-6164057 Arabidopsis lyrata
AL3G27080 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 6161060-6162059 Arabidopsis lyrata
AL3G27080 2.0kb upstream 2.0kb upstream 3998   true scaffold_3: 6162060-6166057 Arabidopsis lyrata
AL3G27080 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 6164058-6166057 Arabidopsis lyrata
AL3G27080 2.0kb downstream 2.0kb downstream 3998   true scaffold_3: 6160060-6164057 Arabidopsis lyrata
AL3G27080 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 6160060-6162059 Arabidopsis lyrata
AL3G27080 5.0kb upstream 5.0kb upstream 6998   true scaffold_3: 6162060-6169057 Arabidopsis lyrata
AL3G27080 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 6164058-6169057 Arabidopsis lyrata
AL3G27080 5.0kb downstream 5.0kb downstream 6998   true scaffold_3: 6157060-6164057 Arabidopsis lyrata
AL3G27080 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 6157060-6162059 Arabidopsis lyrata
AL3G27080 10.0kb upstream 10.0kb upstream 11998   true scaffold_3: 6162060-6174057 Arabidopsis lyrata
AL3G27080 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 6164058-6174057 Arabidopsis lyrata
AL3G27080 10.0kb downstream 10.0kb downstream 11998   true scaffold_3: 6152060-6164057 Arabidopsis lyrata
AL3G27080 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 6152060-6162059 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369944 5261 Brassicaceae View MSA
123829514 5264 Brassicales-Malvales View MSA
124345539 5266 SBM View MSA
124253954 5268 Malvidae View MSA
124072962 5270 Rosid View MSA
123749486 5271 Pentapetalae View MSA
122796562 5272 Eudicot View MSA
122048091 5273 Angiosperm View MSA
121310847 5274 Embryophyte View MSA
123348232 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain