Gene : AL3G30960 A. lyrata v2.1

Defline:  (1 of 9) PF05542 - Protein of unknown function (DUF760) (DUF760) Genomic Order:  1998
Name:  ? AL3G30960 Secondary Identifier:  ? PAC:35941939

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G30960 0.5kb upstream 0.5kb upstream 2359   true scaffold_3: 7599286-7601644 Arabidopsis lyrata
AL3G30960 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 7601145-7601644 Arabidopsis lyrata
AL3G30960 0.5kb downstream 0.5kb downstream 2359   true scaffold_3: 7598786-7601144 Arabidopsis lyrata
AL3G30960 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 7598786-7599285 Arabidopsis lyrata
AL3G30960 1.0kb upstream 1.0kb upstream 2859   true scaffold_3: 7599286-7602144 Arabidopsis lyrata
AL3G30960 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 7601145-7602144 Arabidopsis lyrata
AL3G30960 1.0kb downstream 1.0kb downstream 2859   true scaffold_3: 7598286-7601144 Arabidopsis lyrata
AL3G30960 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 7598286-7599285 Arabidopsis lyrata
AL3G30960 2.0kb upstream 2.0kb upstream 3859   true scaffold_3: 7599286-7603144 Arabidopsis lyrata
AL3G30960 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 7601145-7603144 Arabidopsis lyrata
AL3G30960 2.0kb downstream 2.0kb downstream 3859   true scaffold_3: 7597286-7601144 Arabidopsis lyrata
AL3G30960 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 7597286-7599285 Arabidopsis lyrata
AL3G30960 5.0kb upstream 5.0kb upstream 6859   true scaffold_3: 7599286-7606144 Arabidopsis lyrata
AL3G30960 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 7601145-7606144 Arabidopsis lyrata
AL3G30960 5.0kb downstream 5.0kb downstream 6859   true scaffold_3: 7594286-7601144 Arabidopsis lyrata
AL3G30960 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 7594286-7599285 Arabidopsis lyrata
AL3G30960 10.0kb upstream 10.0kb upstream 11859   true scaffold_3: 7599286-7611144 Arabidopsis lyrata
AL3G30960 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 7601145-7611144 Arabidopsis lyrata
AL3G30960 10.0kb downstream 10.0kb downstream 11859   true scaffold_3: 7589286-7601144 Arabidopsis lyrata
AL3G30960 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 7589286-7599285 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364866 5261 Brassicaceae View MSA
123836185 5264 Brassicales-Malvales View MSA
124344586 5266 SBM View MSA
124241762 5268 Malvidae View MSA
124062530 5270 Rosid View MSA
123743837 5271 Pentapetalae View MSA
122792166 5272 Eudicot View MSA
122045353 5273 Angiosperm View MSA
121310438 5274 Embryophyte View MSA
123428654 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain