Gene : AL3G30020 A. lyrata v2.1
Defline:  (1 of 1) PTHR11246//PTHR11246:SF11 - PRE-MRNA SPLICING FACTOR // SUBFAMILY NOT NAMED Genomic Order:  1905
Name:  ? AL3G30020 Secondary Identifier:  ? PAC:35943141
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G30020 0.5kb upstream 0.5kb upstream 4024   true scaffold_3: 7263485-7267508 Arabidopsis lyrata
AL3G30020 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 7267009-7267508 Arabidopsis lyrata
AL3G30020 0.5kb downstream 0.5kb downstream 4024   true scaffold_3: 7262985-7267008 Arabidopsis lyrata
AL3G30020 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 7262985-7263484 Arabidopsis lyrata
AL3G30020 1.0kb upstream 1.0kb upstream 4524   true scaffold_3: 7263485-7268008 Arabidopsis lyrata
AL3G30020 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 7267009-7268008 Arabidopsis lyrata
AL3G30020 1.0kb downstream 1.0kb downstream 4524   true scaffold_3: 7262485-7267008 Arabidopsis lyrata
AL3G30020 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 7262485-7263484 Arabidopsis lyrata
AL3G30020 2.0kb upstream 2.0kb upstream 5524   true scaffold_3: 7263485-7269008 Arabidopsis lyrata
AL3G30020 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 7267009-7269008 Arabidopsis lyrata
AL3G30020 2.0kb downstream 2.0kb downstream 5524   true scaffold_3: 7261485-7267008 Arabidopsis lyrata
AL3G30020 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 7261485-7263484 Arabidopsis lyrata
AL3G30020 5.0kb upstream 5.0kb upstream 8524   true scaffold_3: 7263485-7272008 Arabidopsis lyrata
AL3G30020 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 7267009-7272008 Arabidopsis lyrata
AL3G30020 5.0kb downstream 5.0kb downstream 8524   true scaffold_3: 7258485-7267008 Arabidopsis lyrata
AL3G30020 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 7258485-7263484 Arabidopsis lyrata
AL3G30020 10.0kb upstream 10.0kb upstream 13524   true scaffold_3: 7263485-7277008 Arabidopsis lyrata
AL3G30020 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 7267009-7277008 Arabidopsis lyrata
AL3G30020 10.0kb downstream 10.0kb downstream 13524   true scaffold_3: 7253485-7267008 Arabidopsis lyrata
AL3G30020 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 7253485-7263484 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373583 5261 Brassicaceae View MSA
123831565 5264 Brassicales-Malvales View MSA
124342320 5266 SBM View MSA
124239341 5268 Malvidae View MSA
124068395 5270 Rosid View MSA
123738707 5271 Pentapetalae View MSA
122785733 5272 Eudicot View MSA
122045803 5273 Angiosperm View MSA
121347317 5274 Embryophyte View MSA
123426639 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain