Gene : AL3G30280 A. lyrata v2.1

Defline:  (1 of 1) 1.2.1.25//1.8.1.4 - 2-oxoisovalerate dehydrogenase (acylating) // Dihydrolipoyl dehydrogenase / Lipoyl dehydrogenase Genomic Order:  1930
Name:  ? AL3G30280 Secondary Identifier:  ? PAC:35942147

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata GLYCLEAV-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-5046 Arabidopsis lyrata pathologic  
Alyrata PWY-5084 Arabidopsis lyrata pathologic  
Alyrata PWY-5173 Arabidopsis lyrata pathologic  
Alyrata PWY-5464 Arabidopsis lyrata pathologic  
Alyrata PYRUVDEHYD-PWY Arabidopsis lyrata pathologic  
Alyrata VALDEG-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G30280 0.5kb upstream 0.5kb upstream 2995   true scaffold_3: 7349034-7352028 Arabidopsis lyrata
AL3G30280 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 7351529-7352028 Arabidopsis lyrata
AL3G30280 0.5kb downstream 0.5kb downstream 2995   true scaffold_3: 7348534-7351528 Arabidopsis lyrata
AL3G30280 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 7348534-7349033 Arabidopsis lyrata
AL3G30280 1.0kb upstream 1.0kb upstream 3495   true scaffold_3: 7349034-7352528 Arabidopsis lyrata
AL3G30280 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 7351529-7352528 Arabidopsis lyrata
AL3G30280 1.0kb downstream 1.0kb downstream 3495   true scaffold_3: 7348034-7351528 Arabidopsis lyrata
AL3G30280 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 7348034-7349033 Arabidopsis lyrata
AL3G30280 2.0kb upstream 2.0kb upstream 4495   true scaffold_3: 7349034-7353528 Arabidopsis lyrata
AL3G30280 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 7351529-7353528 Arabidopsis lyrata
AL3G30280 2.0kb downstream 2.0kb downstream 4495   true scaffold_3: 7347034-7351528 Arabidopsis lyrata
AL3G30280 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 7347034-7349033 Arabidopsis lyrata
AL3G30280 5.0kb upstream 5.0kb upstream 7495   true scaffold_3: 7349034-7356528 Arabidopsis lyrata
AL3G30280 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 7351529-7356528 Arabidopsis lyrata
AL3G30280 5.0kb downstream 5.0kb downstream 7495   true scaffold_3: 7344034-7351528 Arabidopsis lyrata
AL3G30280 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 7344034-7349033 Arabidopsis lyrata
AL3G30280 10.0kb upstream 10.0kb upstream 12495   true scaffold_3: 7349034-7361528 Arabidopsis lyrata
AL3G30280 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 7351529-7361528 Arabidopsis lyrata
AL3G30280 10.0kb downstream 10.0kb downstream 12495   true scaffold_3: 7339034-7351528 Arabidopsis lyrata
AL3G30280 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 7339034-7349033 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375274 5261 Brassicaceae View MSA
123836893 5264 Brassicales-Malvales View MSA
124345171 5266 SBM View MSA
124239269 5268 Malvidae View MSA
124063869 5270 Rosid View MSA
123749055 5271 Pentapetalae View MSA
122790901 5272 Eudicot View MSA
122041676 5273 Angiosperm View MSA
121345591 5274 Embryophyte View MSA
123424332 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain