Gene : AL3G39260 A. lyrata v2.1

Defline:  (1 of 3) 2.6.1.16 - Glutamine--fructose-6-phosphate transaminase (isomerizing) / L-glutamine-D-fructose-6-phosphate amidotransferase Genomic Order:  2780
Name:  ? AL3G39260 Secondary Identifier:  ? PAC:35944322

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata UDPNACETYLGALSYN-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G39260 0.5kb upstream 0.5kb upstream 3827   true scaffold_3: 11422302-11426128 Arabidopsis lyrata
AL3G39260 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 11422302-11422801 Arabidopsis lyrata
AL3G39260 0.5kb downstream 0.5kb downstream 3827   true scaffold_3: 11422802-11426628 Arabidopsis lyrata
AL3G39260 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 11426129-11426628 Arabidopsis lyrata
AL3G39260 1.0kb upstream 1.0kb upstream 4327   true scaffold_3: 11421802-11426128 Arabidopsis lyrata
AL3G39260 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 11421802-11422801 Arabidopsis lyrata
AL3G39260 1.0kb downstream 1.0kb downstream 4327   true scaffold_3: 11422802-11427128 Arabidopsis lyrata
AL3G39260 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 11426129-11427128 Arabidopsis lyrata
AL3G39260 2.0kb upstream 2.0kb upstream 5327   true scaffold_3: 11420802-11426128 Arabidopsis lyrata
AL3G39260 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 11420802-11422801 Arabidopsis lyrata
AL3G39260 2.0kb downstream 2.0kb downstream 5327   true scaffold_3: 11422802-11428128 Arabidopsis lyrata
AL3G39260 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 11426129-11428128 Arabidopsis lyrata
AL3G39260 5.0kb upstream 5.0kb upstream 8327   true scaffold_3: 11417802-11426128 Arabidopsis lyrata
AL3G39260 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 11417802-11422801 Arabidopsis lyrata
AL3G39260 5.0kb downstream 5.0kb downstream 8327   true scaffold_3: 11422802-11431128 Arabidopsis lyrata
AL3G39260 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 11426129-11431128 Arabidopsis lyrata
AL3G39260 10.0kb upstream 10.0kb upstream 13327   true scaffold_3: 11412802-11426128 Arabidopsis lyrata
AL3G39260 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 11412802-11422801 Arabidopsis lyrata
AL3G39260 10.0kb downstream 10.0kb downstream 13327   true scaffold_3: 11422802-11436128 Arabidopsis lyrata
AL3G39260 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 11426129-11436128 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378372 5261 Brassicaceae View MSA
123833504 5264 Brassicales-Malvales View MSA
124344294 5266 SBM View MSA
124243865 5268 Malvidae View MSA
124061013 5270 Rosid View MSA
123739905 5271 Pentapetalae View MSA
122790507 5272 Eudicot View MSA
122044665 5273 Angiosperm View MSA
121344143 5274 Embryophyte View MSA
123424089 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain