Gene : AL3G42350 A. lyrata v2.1

Defline:  (1 of 1) K10520 - ankyrin repeat and BTB/POZ domain-containing protein 1 (ABTB1, BPOZ) Genomic Order:  3056
Name:  ? AL3G42350 Secondary Identifier:  ? PAC:35942638

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G42350 0.5kb upstream 0.5kb upstream 3243   true scaffold_3: 13534622-13537864 Arabidopsis lyrata
AL3G42350 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 13534622-13535121 Arabidopsis lyrata
AL3G42350 0.5kb downstream 0.5kb downstream 3243   true scaffold_3: 13535122-13538364 Arabidopsis lyrata
AL3G42350 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 13537865-13538364 Arabidopsis lyrata
AL3G42350 1.0kb upstream 1.0kb upstream 3743   true scaffold_3: 13534122-13537864 Arabidopsis lyrata
AL3G42350 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 13534122-13535121 Arabidopsis lyrata
AL3G42350 1.0kb downstream 1.0kb downstream 3743   true scaffold_3: 13535122-13538864 Arabidopsis lyrata
AL3G42350 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 13537865-13538864 Arabidopsis lyrata
AL3G42350 2.0kb upstream 2.0kb upstream 4743   true scaffold_3: 13533122-13537864 Arabidopsis lyrata
AL3G42350 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 13533122-13535121 Arabidopsis lyrata
AL3G42350 2.0kb downstream 2.0kb downstream 4743   true scaffold_3: 13535122-13539864 Arabidopsis lyrata
AL3G42350 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 13537865-13539864 Arabidopsis lyrata
AL3G42350 5.0kb upstream 5.0kb upstream 7743   true scaffold_3: 13530122-13537864 Arabidopsis lyrata
AL3G42350 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 13530122-13535121 Arabidopsis lyrata
AL3G42350 5.0kb downstream 5.0kb downstream 7743   true scaffold_3: 13535122-13542864 Arabidopsis lyrata
AL3G42350 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 13537865-13542864 Arabidopsis lyrata
AL3G42350 10.0kb upstream 10.0kb upstream 12743   true scaffold_3: 13525122-13537864 Arabidopsis lyrata
AL3G42350 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 13525122-13535121 Arabidopsis lyrata
AL3G42350 10.0kb downstream 10.0kb downstream 12743   true scaffold_3: 13535122-13547864 Arabidopsis lyrata
AL3G42350 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 13537865-13547864 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367544 5261 Brassicaceae View MSA
123834908 5264 Brassicales-Malvales View MSA
124341196 5266 SBM View MSA
124242981 5268 Malvidae View MSA
124064930 5270 Rosid View MSA
123737070 5271 Pentapetalae View MSA
122793616 5272 Eudicot View MSA
122051228 5273 Angiosperm View MSA
123429159 5275 Viridiplantae View MSA
121345806 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain