Gene : AL3G43690 A. lyrata v2.1

Defline:  (1 of 1) PTHR22893:SF67 - 12-OXOPHYTODIENOATE REDUCTASE 3 Genomic Order:  3169
Name:  ? AL3G43690 Secondary Identifier:  ? PAC:35942202

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-735 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G43690 0.5kb upstream 0.5kb upstream 3804   true scaffold_3: 14606798-14610601 Arabidopsis lyrata
AL3G43690 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 14610102-14610601 Arabidopsis lyrata
AL3G43690 0.5kb downstream 0.5kb downstream 3804   true scaffold_3: 14606298-14610101 Arabidopsis lyrata
AL3G43690 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 14606298-14606797 Arabidopsis lyrata
AL3G43690 1.0kb upstream 1.0kb upstream 4304   true scaffold_3: 14606798-14611101 Arabidopsis lyrata
AL3G43690 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 14610102-14611101 Arabidopsis lyrata
AL3G43690 1.0kb downstream 1.0kb downstream 4304   true scaffold_3: 14605798-14610101 Arabidopsis lyrata
AL3G43690 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 14605798-14606797 Arabidopsis lyrata
AL3G43690 2.0kb upstream 2.0kb upstream 5304   true scaffold_3: 14606798-14612101 Arabidopsis lyrata
AL3G43690 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 14610102-14612101 Arabidopsis lyrata
AL3G43690 2.0kb downstream 2.0kb downstream 5304   true scaffold_3: 14604798-14610101 Arabidopsis lyrata
AL3G43690 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 14604798-14606797 Arabidopsis lyrata
AL3G43690 5.0kb upstream 5.0kb upstream 8304   true scaffold_3: 14606798-14615101 Arabidopsis lyrata
AL3G43690 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 14610102-14615101 Arabidopsis lyrata
AL3G43690 5.0kb downstream 5.0kb downstream 8304   true scaffold_3: 14601798-14610101 Arabidopsis lyrata
AL3G43690 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 14601798-14606797 Arabidopsis lyrata
AL3G43690 10.0kb upstream 10.0kb upstream 13304   true scaffold_3: 14606798-14620101 Arabidopsis lyrata
AL3G43690 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 14610102-14620101 Arabidopsis lyrata
AL3G43690 10.0kb downstream 10.0kb downstream 13304   true scaffold_3: 14596798-14610101 Arabidopsis lyrata
AL3G43690 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 14596798-14606797 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365075 5261 Brassicaceae View MSA
123829939 5264 Brassicales-Malvales View MSA
124321640 5266 SBM View MSA
124251945 5268 Malvidae View MSA
124067438 5270 Rosid View MSA
123752843 5271 Pentapetalae View MSA
122793200 5272 Eudicot View MSA
122045758 5273 Angiosperm View MSA
121351640 5274 Embryophyte View MSA
123428487 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain