Gene : AL3G44070 A. lyrata v2.1

Defline:  (1 of 1) 5.4.99.8 - Cycloartenol synthase / 2,3-epoxysqualene--cycloartenol cyclase Genomic Order:  3202
Name:  ? AL3G44070 Secondary Identifier:  ? PAC:35943834

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-2541 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G44070 0.5kb upstream 0.5kb upstream 6994   true scaffold_3: 15053309-15060302 Arabidopsis lyrata
AL3G44070 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 15053309-15053808 Arabidopsis lyrata
AL3G44070 0.5kb downstream 0.5kb downstream 6994   true scaffold_3: 15053809-15060802 Arabidopsis lyrata
AL3G44070 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 15060303-15060802 Arabidopsis lyrata
AL3G44070 1.0kb upstream 1.0kb upstream 7494   true scaffold_3: 15052809-15060302 Arabidopsis lyrata
AL3G44070 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 15052809-15053808 Arabidopsis lyrata
AL3G44070 1.0kb downstream 1.0kb downstream 7494   true scaffold_3: 15053809-15061302 Arabidopsis lyrata
AL3G44070 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 15060303-15061302 Arabidopsis lyrata
AL3G44070 2.0kb upstream 2.0kb upstream 8494   true scaffold_3: 15051809-15060302 Arabidopsis lyrata
AL3G44070 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 15051809-15053808 Arabidopsis lyrata
AL3G44070 2.0kb downstream 2.0kb downstream 8494   true scaffold_3: 15053809-15062302 Arabidopsis lyrata
AL3G44070 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 15060303-15062302 Arabidopsis lyrata
AL3G44070 5.0kb upstream 5.0kb upstream 11494   true scaffold_3: 15048809-15060302 Arabidopsis lyrata
AL3G44070 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 15048809-15053808 Arabidopsis lyrata
AL3G44070 5.0kb downstream 5.0kb downstream 11494   true scaffold_3: 15053809-15065302 Arabidopsis lyrata
AL3G44070 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 15060303-15065302 Arabidopsis lyrata
AL3G44070 10.0kb upstream 10.0kb upstream 16494   true scaffold_3: 15043809-15060302 Arabidopsis lyrata
AL3G44070 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 15043809-15053808 Arabidopsis lyrata
AL3G44070 10.0kb downstream 10.0kb downstream 16494   true scaffold_3: 15053809-15070302 Arabidopsis lyrata
AL3G44070 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 15060303-15070302 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362995 5261 Brassicaceae View MSA
123832061 5264 Brassicales-Malvales View MSA
124341862 5266 SBM View MSA
124253779 5268 Malvidae View MSA
124061853 5270 Rosid View MSA
123750129 5271 Pentapetalae View MSA
122795524 5272 Eudicot View MSA
122043543 5273 Angiosperm View MSA
121345283 5274 Embryophyte View MSA
123424991 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain