Gene : AL3G43120 A. lyrata v2.1

Defline:  (1 of 3) PTHR35709:SF1 - PROTEIN PROTON GRADIENT REGULATION 5, CHLOROPLASTIC Genomic Order:  3124
Name:  ? AL3G43120 Secondary Identifier:  ? PAC:35943689

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G43120 0.5kb upstream 0.5kb upstream 1346   true scaffold_3: 14147016-14148361 Arabidopsis lyrata
AL3G43120 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 14147862-14148361 Arabidopsis lyrata
AL3G43120 0.5kb downstream 0.5kb downstream 1346   true scaffold_3: 14146516-14147861 Arabidopsis lyrata
AL3G43120 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 14146516-14147015 Arabidopsis lyrata
AL3G43120 1.0kb upstream 1.0kb upstream 1846   true scaffold_3: 14147016-14148861 Arabidopsis lyrata
AL3G43120 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 14147862-14148861 Arabidopsis lyrata
AL3G43120 1.0kb downstream 1.0kb downstream 1846   true scaffold_3: 14146016-14147861 Arabidopsis lyrata
AL3G43120 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 14146016-14147015 Arabidopsis lyrata
AL3G43120 2.0kb upstream 2.0kb upstream 2846   true scaffold_3: 14147016-14149861 Arabidopsis lyrata
AL3G43120 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 14147862-14149861 Arabidopsis lyrata
AL3G43120 2.0kb downstream 2.0kb downstream 2846   true scaffold_3: 14145016-14147861 Arabidopsis lyrata
AL3G43120 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 14145016-14147015 Arabidopsis lyrata
AL3G43120 5.0kb upstream 5.0kb upstream 5846   true scaffold_3: 14147016-14152861 Arabidopsis lyrata
AL3G43120 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 14147862-14152861 Arabidopsis lyrata
AL3G43120 5.0kb downstream 5.0kb downstream 5846   true scaffold_3: 14142016-14147861 Arabidopsis lyrata
AL3G43120 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 14142016-14147015 Arabidopsis lyrata
AL3G43120 10.0kb upstream 10.0kb upstream 10846   true scaffold_3: 14147016-14157861 Arabidopsis lyrata
AL3G43120 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 14147862-14157861 Arabidopsis lyrata
AL3G43120 10.0kb downstream 10.0kb downstream 10846   true scaffold_3: 14137016-14147861 Arabidopsis lyrata
AL3G43120 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 14137016-14147015 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368481 5261 Brassicaceae View MSA
123835934 5264 Brassicales-Malvales View MSA
124350870 5266 SBM View MSA
124253791 5268 Malvidae View MSA
124063671 5270 Rosid View MSA
123746735 5271 Pentapetalae View MSA
122772016 5272 Eudicot View MSA
122041936 5273 Angiosperm View MSA
121350110 5274 Embryophyte View MSA
123425373 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain