Gene : AL3G51340 A. lyrata v2.1

Defline:  (1 of 2) PTHR31388:SF16 - PEROXIDASE 14-RELATED Genomic Order:  3819
Name:  ? AL3G51340 Secondary Identifier:  ? PAC:35944087

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5466 Arabidopsis lyrata pathologic  
Alyrata PWY-7214 Arabidopsis lyrata pathologic  
Alyrata PWY-7445 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G51340 0.5kb upstream 0.5kb upstream 2075   true scaffold_3: 22565167-22567241 Arabidopsis lyrata
AL3G51340 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 22566742-22567241 Arabidopsis lyrata
AL3G51340 0.5kb downstream 0.5kb downstream 2075   true scaffold_3: 22564667-22566741 Arabidopsis lyrata
AL3G51340 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 22564667-22565166 Arabidopsis lyrata
AL3G51340 1.0kb upstream 1.0kb upstream 2575   true scaffold_3: 22565167-22567741 Arabidopsis lyrata
AL3G51340 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 22566742-22567741 Arabidopsis lyrata
AL3G51340 1.0kb downstream 1.0kb downstream 2575   true scaffold_3: 22564167-22566741 Arabidopsis lyrata
AL3G51340 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 22564167-22565166 Arabidopsis lyrata
AL3G51340 2.0kb upstream 2.0kb upstream 3575   true scaffold_3: 22565167-22568741 Arabidopsis lyrata
AL3G51340 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 22566742-22568741 Arabidopsis lyrata
AL3G51340 2.0kb downstream 2.0kb downstream 3575   true scaffold_3: 22563167-22566741 Arabidopsis lyrata
AL3G51340 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 22563167-22565166 Arabidopsis lyrata
AL3G51340 5.0kb upstream 5.0kb upstream 6575   true scaffold_3: 22565167-22571741 Arabidopsis lyrata
AL3G51340 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 22566742-22571741 Arabidopsis lyrata
AL3G51340 5.0kb downstream 5.0kb downstream 6575   true scaffold_3: 22560167-22566741 Arabidopsis lyrata
AL3G51340 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 22560167-22565166 Arabidopsis lyrata
AL3G51340 10.0kb upstream 10.0kb upstream 11575   true scaffold_3: 22565167-22576741 Arabidopsis lyrata
AL3G51340 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 22566742-22576741 Arabidopsis lyrata
AL3G51340 10.0kb downstream 10.0kb downstream 11575   true scaffold_3: 22555167-22566741 Arabidopsis lyrata
AL3G51340 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 22555167-22565166 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371157 5261 Brassicaceae View MSA
123841909 5264 Brassicales-Malvales View MSA
124350958 5266 SBM View MSA
124252962 5268 Malvidae View MSA
124074247 5270 Rosid View MSA
123752607 5271 Pentapetalae View MSA
122796741 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain