Gene : AL3G50000 A. lyrata v2.1
Defline:  (1 of 3) PTHR32002:SF3 - PROTEIN NLP1-RELATED Genomic Order:  3695
Name:  ? AL3G50000 Secondary Identifier:  ? PAC:35942506
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G50000 0.5kb upstream 0.5kb upstream 4955   true scaffold_3: 21849244-21854198 Arabidopsis lyrata
AL3G50000 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 21853699-21854198 Arabidopsis lyrata
AL3G50000 0.5kb downstream 0.5kb downstream 4955   true scaffold_3: 21848744-21853698 Arabidopsis lyrata
AL3G50000 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 21848744-21849243 Arabidopsis lyrata
AL3G50000 1.0kb upstream 1.0kb upstream 5455   true scaffold_3: 21849244-21854698 Arabidopsis lyrata
AL3G50000 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 21853699-21854698 Arabidopsis lyrata
AL3G50000 1.0kb downstream 1.0kb downstream 5455   true scaffold_3: 21848244-21853698 Arabidopsis lyrata
AL3G50000 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 21848244-21849243 Arabidopsis lyrata
AL3G50000 2.0kb upstream 2.0kb upstream 6455   true scaffold_3: 21849244-21855698 Arabidopsis lyrata
AL3G50000 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 21853699-21855698 Arabidopsis lyrata
AL3G50000 2.0kb downstream 2.0kb downstream 6455   true scaffold_3: 21847244-21853698 Arabidopsis lyrata
AL3G50000 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 21847244-21849243 Arabidopsis lyrata
AL3G50000 5.0kb upstream 5.0kb upstream 9455   true scaffold_3: 21849244-21858698 Arabidopsis lyrata
AL3G50000 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 21853699-21858698 Arabidopsis lyrata
AL3G50000 5.0kb downstream 5.0kb downstream 9455   true scaffold_3: 21844244-21853698 Arabidopsis lyrata
AL3G50000 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 21844244-21849243 Arabidopsis lyrata
AL3G50000 10.0kb upstream 10.0kb upstream 14455   true scaffold_3: 21849244-21863698 Arabidopsis lyrata
AL3G50000 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 21853699-21863698 Arabidopsis lyrata
AL3G50000 10.0kb downstream 10.0kb downstream 14455   true scaffold_3: 21839244-21853698 Arabidopsis lyrata
AL3G50000 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 21839244-21849243 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379289 5261 Brassicaceae View MSA
123802190 5264 Brassicales-Malvales View MSA
124299404 5266 SBM View MSA
124251360 5268 Malvidae View MSA
124068649 5270 Rosid View MSA
123748855 5271 Pentapetalae View MSA
122793045 5272 Eudicot View MSA
122051349 5273 Angiosperm View MSA
121350940 5274 Embryophyte View MSA
123428170 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain