Gene : AL3G49690 A. lyrata v2.1
Defline:  (1 of 1) PTHR24012:SF388 - SPLICING FACTOR, CC1-LIKE PROTEIN Genomic Order:  3666
Name:  ? AL3G49690 Secondary Identifier:  ? PAC:35940701
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL3G49690 0.5kb upstream 0.5kb upstream 5535   true scaffold_3: 21629962-21635496 Arabidopsis lyrata
AL3G49690 0.5kb upstream 0.5kb upstream 500   false scaffold_3: 21634997-21635496 Arabidopsis lyrata
AL3G49690 0.5kb downstream 0.5kb downstream 5535   true scaffold_3: 21629462-21634996 Arabidopsis lyrata
AL3G49690 0.5kb downstream 0.5kb downstream 500   false scaffold_3: 21629462-21629961 Arabidopsis lyrata
AL3G49690 1.0kb upstream 1.0kb upstream 6035   true scaffold_3: 21629962-21635996 Arabidopsis lyrata
AL3G49690 1.0kb upstream 1.0kb upstream 1000   false scaffold_3: 21634997-21635996 Arabidopsis lyrata
AL3G49690 1.0kb downstream 1.0kb downstream 6035   true scaffold_3: 21628962-21634996 Arabidopsis lyrata
AL3G49690 1.0kb downstream 1.0kb downstream 1000   false scaffold_3: 21628962-21629961 Arabidopsis lyrata
AL3G49690 2.0kb upstream 2.0kb upstream 7035   true scaffold_3: 21629962-21636996 Arabidopsis lyrata
AL3G49690 2.0kb upstream 2.0kb upstream 2000   false scaffold_3: 21634997-21636996 Arabidopsis lyrata
AL3G49690 2.0kb downstream 2.0kb downstream 7035   true scaffold_3: 21627962-21634996 Arabidopsis lyrata
AL3G49690 2.0kb downstream 2.0kb downstream 2000   false scaffold_3: 21627962-21629961 Arabidopsis lyrata
AL3G49690 5.0kb upstream 5.0kb upstream 10035   true scaffold_3: 21629962-21639996 Arabidopsis lyrata
AL3G49690 5.0kb upstream 5.0kb upstream 5000   false scaffold_3: 21634997-21639996 Arabidopsis lyrata
AL3G49690 5.0kb downstream 5.0kb downstream 10035   true scaffold_3: 21624962-21634996 Arabidopsis lyrata
AL3G49690 5.0kb downstream 5.0kb downstream 5000   false scaffold_3: 21624962-21629961 Arabidopsis lyrata
AL3G49690 10.0kb upstream 10.0kb upstream 15035   true scaffold_3: 21629962-21644996 Arabidopsis lyrata
AL3G49690 10.0kb upstream 10.0kb upstream 10000   false scaffold_3: 21634997-21644996 Arabidopsis lyrata
AL3G49690 10.0kb downstream 10.0kb downstream 15035   true scaffold_3: 21619962-21634996 Arabidopsis lyrata
AL3G49690 10.0kb downstream 10.0kb downstream 10000   false scaffold_3: 21619962-21629961 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361251 5261 Brassicaceae View MSA
123829205 5264 Brassicales-Malvales View MSA
124336955 5266 SBM View MSA
124240263 5268 Malvidae View MSA
124068608 5270 Rosid View MSA
123744979 5271 Pentapetalae View MSA
122786536 5272 Eudicot View MSA
122047022 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121344314 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain