Gene : AL4G11040 A. lyrata v2.1

Defline:  (1 of 4) 2.4.1.29 - Cellulose synthase (GDP-forming) / GDP-glucose-cellulose glucosyltransferase Genomic Order:  92
Name:  ? AL4G11040 Secondary Identifier:  ? PAC:35923871

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-1001 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G11040 0.5kb upstream 0.5kb upstream 5980   true scaffold_4: 485949-491928 Arabidopsis lyrata
AL4G11040 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 485949-486448 Arabidopsis lyrata
AL4G11040 0.5kb downstream 0.5kb downstream 5980   true scaffold_4: 486449-492428 Arabidopsis lyrata
AL4G11040 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 491929-492428 Arabidopsis lyrata
AL4G11040 1.0kb upstream 1.0kb upstream 6480   true scaffold_4: 485449-491928 Arabidopsis lyrata
AL4G11040 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 485449-486448 Arabidopsis lyrata
AL4G11040 1.0kb downstream 1.0kb downstream 6480   true scaffold_4: 486449-492928 Arabidopsis lyrata
AL4G11040 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 491929-492928 Arabidopsis lyrata
AL4G11040 2.0kb upstream 2.0kb upstream 7480   true scaffold_4: 484449-491928 Arabidopsis lyrata
AL4G11040 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 484449-486448 Arabidopsis lyrata
AL4G11040 2.0kb downstream 2.0kb downstream 7480   true scaffold_4: 486449-493928 Arabidopsis lyrata
AL4G11040 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 491929-493928 Arabidopsis lyrata
AL4G11040 5.0kb upstream 5.0kb upstream 10480   true scaffold_4: 481449-491928 Arabidopsis lyrata
AL4G11040 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 481449-486448 Arabidopsis lyrata
AL4G11040 5.0kb downstream 5.0kb downstream 10480   true scaffold_4: 486449-496928 Arabidopsis lyrata
AL4G11040 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 491929-496928 Arabidopsis lyrata
AL4G11040 10.0kb upstream 10.0kb upstream 15480   true scaffold_4: 476449-491928 Arabidopsis lyrata
AL4G11040 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 476449-486448 Arabidopsis lyrata
AL4G11040 10.0kb downstream 10.0kb downstream 15480   true scaffold_4: 486449-501928 Arabidopsis lyrata
AL4G11040 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 491929-501928 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122332051 5261 Brassicaceae View MSA
123773168 5264 Brassicales-Malvales View MSA
124271665 5266 SBM View MSA
124127631 5268 Malvidae View MSA
123856460 5270 Rosid View MSA
123442384 5271 Pentapetalae View MSA
122795199 5272 Eudicot View MSA
122048668 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain