Gene : AL39U10010 A. lyrata v2.1

Defline:  (1 of 2) PTHR12506:SF19 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 32 Genomic Order:  1
Name:  ? AL39U10010 Secondary Identifier:  ? PAC:35951234

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL39U10010 0.5kb upstream 0.5kb upstream 1036   true scaffold_39: 1-1036 Arabidopsis lyrata
AL39U10010 0.5kb upstream 0.5kb upstream 118   false scaffold_39: 1-118 Arabidopsis lyrata
AL39U10010 0.5kb downstream 0.5kb downstream 1418   true scaffold_39: 119-1536 Arabidopsis lyrata
AL39U10010 0.5kb downstream 0.5kb downstream 500   false scaffold_39: 1037-1536 Arabidopsis lyrata
AL39U10010 1.0kb upstream 1.0kb upstream 1036   true scaffold_39: 1-1036 Arabidopsis lyrata
AL39U10010 1.0kb upstream 1.0kb upstream 118   false scaffold_39: 1-118 Arabidopsis lyrata
AL39U10010 1.0kb downstream 1.0kb downstream 1918   true scaffold_39: 119-2036 Arabidopsis lyrata
AL39U10010 1.0kb downstream 1.0kb downstream 1000   false scaffold_39: 1037-2036 Arabidopsis lyrata
AL39U10010 2.0kb upstream 2.0kb upstream 1036   true scaffold_39: 1-1036 Arabidopsis lyrata
AL39U10010 2.0kb upstream 2.0kb upstream 118   false scaffold_39: 1-118 Arabidopsis lyrata
AL39U10010 2.0kb downstream 2.0kb downstream 2918   true scaffold_39: 119-3036 Arabidopsis lyrata
AL39U10010 2.0kb downstream 2.0kb downstream 2000   false scaffold_39: 1037-3036 Arabidopsis lyrata
AL39U10010 5.0kb upstream 5.0kb upstream 1036   true scaffold_39: 1-1036 Arabidopsis lyrata
AL39U10010 5.0kb upstream 5.0kb upstream 118   false scaffold_39: 1-118 Arabidopsis lyrata
AL39U10010 5.0kb downstream 5.0kb downstream 5918   true scaffold_39: 119-6036 Arabidopsis lyrata
AL39U10010 5.0kb downstream 5.0kb downstream 5000   false scaffold_39: 1037-6036 Arabidopsis lyrata
AL39U10010 10.0kb upstream 10.0kb upstream 1036   true scaffold_39: 1-1036 Arabidopsis lyrata
AL39U10010 10.0kb upstream 10.0kb upstream 118   false scaffold_39: 1-118 Arabidopsis lyrata
AL39U10010 10.0kb downstream 10.0kb downstream 10918   true scaffold_39: 119-11036 Arabidopsis lyrata
AL39U10010 10.0kb downstream 10.0kb downstream 10000   false scaffold_39: 1037-11036 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122327004 5261 Brassicaceae Singleton cluster - no MSA
123768452 5264 Brassicales-Malvales Singleton cluster - no MSA
124342384 5266 SBM View MSA
124180904 5268 Malvidae View MSA
124073693 5270 Rosid View MSA
123749736 5271 Pentapetalae View MSA
122773292 5272 Eudicot View MSA
122050864 5273 Angiosperm View MSA
121352088 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain