Gene : AL4G12620 A. lyrata v2.1

Defline:  (1 of 12) 2.3.1.103 - Sinapoylglucose--sinapoylglucose O-sinapoyltransferase Genomic Order:  231
Name:  ? AL4G12620 Secondary Identifier:  ? PAC:35923702

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-3301 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G12620 0.5kb upstream 0.5kb upstream 5065   true scaffold_4: 1385169-1390233 Arabidopsis lyrata
AL4G12620 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 1385169-1385668 Arabidopsis lyrata
AL4G12620 0.5kb downstream 0.5kb downstream 5065   true scaffold_4: 1385669-1390733 Arabidopsis lyrata
AL4G12620 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 1390234-1390733 Arabidopsis lyrata
AL4G12620 1.0kb upstream 1.0kb upstream 5565   true scaffold_4: 1384669-1390233 Arabidopsis lyrata
AL4G12620 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 1384669-1385668 Arabidopsis lyrata
AL4G12620 1.0kb downstream 1.0kb downstream 5565   true scaffold_4: 1385669-1391233 Arabidopsis lyrata
AL4G12620 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 1390234-1391233 Arabidopsis lyrata
AL4G12620 2.0kb upstream 2.0kb upstream 6565   true scaffold_4: 1383669-1390233 Arabidopsis lyrata
AL4G12620 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 1383669-1385668 Arabidopsis lyrata
AL4G12620 2.0kb downstream 2.0kb downstream 6565   true scaffold_4: 1385669-1392233 Arabidopsis lyrata
AL4G12620 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 1390234-1392233 Arabidopsis lyrata
AL4G12620 5.0kb upstream 5.0kb upstream 9565   true scaffold_4: 1380669-1390233 Arabidopsis lyrata
AL4G12620 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 1380669-1385668 Arabidopsis lyrata
AL4G12620 5.0kb downstream 5.0kb downstream 9565   true scaffold_4: 1385669-1395233 Arabidopsis lyrata
AL4G12620 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 1390234-1395233 Arabidopsis lyrata
AL4G12620 10.0kb upstream 10.0kb upstream 14565   true scaffold_4: 1375669-1390233 Arabidopsis lyrata
AL4G12620 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 1375669-1385668 Arabidopsis lyrata
AL4G12620 10.0kb downstream 10.0kb downstream 14565   true scaffold_4: 1385669-1400233 Arabidopsis lyrata
AL4G12620 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 1390234-1400233 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380420 5261 Brassicaceae View MSA
123841552 5264 Brassicales-Malvales View MSA
124347801 5266 SBM View MSA
124254219 5268 Malvidae View MSA
124073941 5270 Rosid View MSA
123747460 5271 Pentapetalae View MSA
122796815 5272 Eudicot View MSA
122050629 5273 Angiosperm View MSA
121312037 5274 Embryophyte View MSA
123349249 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain