Gene : AL4G20980 A. lyrata v2.1

Defline:  (1 of 2) 3.1.3.2//3.1.3.41//3.1.3.60 - Acid phosphatase / Phosphomonoesterase // 4-nitrophenylphosphatase // Phosphoenolpyruvate phosphatase Genomic Order:  908
Name:  ? AL4G20980 Secondary Identifier:  ? PAC:35922866

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5083 Arabidopsis lyrata pathologic  
Alyrata PWY-6348 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G20980 0.5kb upstream 0.5kb upstream 3647   true scaffold_4: 11188391-11192037 Arabidopsis lyrata
AL4G20980 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 11191538-11192037 Arabidopsis lyrata
AL4G20980 0.5kb downstream 0.5kb downstream 3647   true scaffold_4: 11187891-11191537 Arabidopsis lyrata
AL4G20980 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 11187891-11188390 Arabidopsis lyrata
AL4G20980 1.0kb upstream 1.0kb upstream 4147   true scaffold_4: 11188391-11192537 Arabidopsis lyrata
AL4G20980 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 11191538-11192537 Arabidopsis lyrata
AL4G20980 1.0kb downstream 1.0kb downstream 4147   true scaffold_4: 11187391-11191537 Arabidopsis lyrata
AL4G20980 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 11187391-11188390 Arabidopsis lyrata
AL4G20980 2.0kb upstream 2.0kb upstream 5147   true scaffold_4: 11188391-11193537 Arabidopsis lyrata
AL4G20980 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 11191538-11193537 Arabidopsis lyrata
AL4G20980 2.0kb downstream 2.0kb downstream 5147   true scaffold_4: 11186391-11191537 Arabidopsis lyrata
AL4G20980 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 11186391-11188390 Arabidopsis lyrata
AL4G20980 5.0kb upstream 5.0kb upstream 8147   true scaffold_4: 11188391-11196537 Arabidopsis lyrata
AL4G20980 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 11191538-11196537 Arabidopsis lyrata
AL4G20980 5.0kb downstream 5.0kb downstream 8147   true scaffold_4: 11183391-11191537 Arabidopsis lyrata
AL4G20980 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 11183391-11188390 Arabidopsis lyrata
AL4G20980 10.0kb upstream 10.0kb upstream 13147   true scaffold_4: 11188391-11201537 Arabidopsis lyrata
AL4G20980 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 11191538-11201537 Arabidopsis lyrata
AL4G20980 10.0kb downstream 10.0kb downstream 13147   true scaffold_4: 11178391-11191537 Arabidopsis lyrata
AL4G20980 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 11178391-11188390 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122327560 5261 Brassicaceae View MSA
123768983 5264 Brassicales-Malvales View MSA
124267558 5266 SBM View MSA
124244832 5268 Malvidae View MSA
124073856 5270 Rosid View MSA
123747428 5271 Pentapetalae View MSA
122789658 5272 Eudicot View MSA
122041724 5273 Angiosperm View MSA
121351600 5274 Embryophyte View MSA
123426131 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain