Gene : AL4G20880 A. lyrata v2.1

Defline:  (1 of 2) PTHR11527:SF156 - HEAT SHOCK FAMILY PROTEIN Genomic Order:  900
Name:  ? AL4G20880 Secondary Identifier:  ? PAC:35923932

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G20880 0.5kb upstream 0.5kb upstream 1380   true scaffold_4: 11099858-11101237 Arabidopsis lyrata
AL4G20880 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 11100738-11101237 Arabidopsis lyrata
AL4G20880 0.5kb downstream 0.5kb downstream 1380   true scaffold_4: 11099358-11100737 Arabidopsis lyrata
AL4G20880 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 11099358-11099857 Arabidopsis lyrata
AL4G20880 1.0kb upstream 1.0kb upstream 1880   true scaffold_4: 11099858-11101737 Arabidopsis lyrata
AL4G20880 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 11100738-11101737 Arabidopsis lyrata
AL4G20880 1.0kb downstream 1.0kb downstream 1880   true scaffold_4: 11098858-11100737 Arabidopsis lyrata
AL4G20880 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 11098858-11099857 Arabidopsis lyrata
AL4G20880 2.0kb upstream 2.0kb upstream 2880   true scaffold_4: 11099858-11102737 Arabidopsis lyrata
AL4G20880 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 11100738-11102737 Arabidopsis lyrata
AL4G20880 2.0kb downstream 2.0kb downstream 2880   true scaffold_4: 11097858-11100737 Arabidopsis lyrata
AL4G20880 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 11097858-11099857 Arabidopsis lyrata
AL4G20880 5.0kb upstream 5.0kb upstream 5880   true scaffold_4: 11099858-11105737 Arabidopsis lyrata
AL4G20880 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 11100738-11105737 Arabidopsis lyrata
AL4G20880 5.0kb downstream 5.0kb downstream 5880   true scaffold_4: 11094858-11100737 Arabidopsis lyrata
AL4G20880 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 11094858-11099857 Arabidopsis lyrata
AL4G20880 10.0kb upstream 10.0kb upstream 10880   true scaffold_4: 11099858-11110737 Arabidopsis lyrata
AL4G20880 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 11100738-11110737 Arabidopsis lyrata
AL4G20880 10.0kb downstream 10.0kb downstream 10880   true scaffold_4: 11089858-11100737 Arabidopsis lyrata
AL4G20880 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 11089858-11099857 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368812 5261 Brassicaceae View MSA
123835384 5264 Brassicales-Malvales View MSA
124322042 5266 SBM View MSA
124247177 5268 Malvidae View MSA
124069899 5270 Rosid View MSA
123751884 5271 Pentapetalae View MSA
122795343 5272 Eudicot View MSA
122051065 5273 Angiosperm View MSA
121312276 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain