Gene : AL4G22040 A. lyrata v2.1

Defline:  (1 of 3) PTHR11062:SF46 - GLUCURONOXYLAN GLUCURONOSYLTRANSFERASE F8H-RELATED Genomic Order:  1004
Name:  ? AL4G22040 Secondary Identifier:  ? PAC:35924621

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5980 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G22040 0.5kb upstream 0.5kb upstream 2527   true scaffold_4: 12044832-12047358 Arabidopsis lyrata
AL4G22040 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 12044832-12045331 Arabidopsis lyrata
AL4G22040 0.5kb downstream 0.5kb downstream 2527   true scaffold_4: 12045332-12047858 Arabidopsis lyrata
AL4G22040 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 12047359-12047858 Arabidopsis lyrata
AL4G22040 1.0kb upstream 1.0kb upstream 3027   true scaffold_4: 12044332-12047358 Arabidopsis lyrata
AL4G22040 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 12044332-12045331 Arabidopsis lyrata
AL4G22040 1.0kb downstream 1.0kb downstream 3027   true scaffold_4: 12045332-12048358 Arabidopsis lyrata
AL4G22040 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 12047359-12048358 Arabidopsis lyrata
AL4G22040 2.0kb upstream 2.0kb upstream 4027   true scaffold_4: 12043332-12047358 Arabidopsis lyrata
AL4G22040 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 12043332-12045331 Arabidopsis lyrata
AL4G22040 2.0kb downstream 2.0kb downstream 4027   true scaffold_4: 12045332-12049358 Arabidopsis lyrata
AL4G22040 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 12047359-12049358 Arabidopsis lyrata
AL4G22040 5.0kb upstream 5.0kb upstream 7027   true scaffold_4: 12040332-12047358 Arabidopsis lyrata
AL4G22040 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 12040332-12045331 Arabidopsis lyrata
AL4G22040 5.0kb downstream 5.0kb downstream 7027   true scaffold_4: 12045332-12052358 Arabidopsis lyrata
AL4G22040 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 12047359-12052358 Arabidopsis lyrata
AL4G22040 10.0kb upstream 10.0kb upstream 12027   true scaffold_4: 12035332-12047358 Arabidopsis lyrata
AL4G22040 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 12035332-12045331 Arabidopsis lyrata
AL4G22040 10.0kb downstream 10.0kb downstream 12027   true scaffold_4: 12045332-12057358 Arabidopsis lyrata
AL4G22040 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 12047359-12057358 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377762 5261 Brassicaceae View MSA
123836741 5264 Brassicales-Malvales View MSA
124339528 5266 SBM View MSA
124254055 5268 Malvidae View MSA
124063526 5270 Rosid View MSA
123741698 5271 Pentapetalae View MSA
122788923 5272 Eudicot View MSA
122042963 5273 Angiosperm View MSA
121350379 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain