Gene : AL4G42030 A. lyrata v2.1

Defline:  (1 of 6) 1.11.1.9 - Glutathione peroxidase Genomic Order:  2875
Name:  ? AL4G42030 Secondary Identifier:  ? PAC:35921952

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata DETOX1-PWY-1 Arabidopsis lyrata pathologic  
Alyrata PWY-4081 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G42030 0.5kb upstream 0.5kb upstream 2604   true scaffold_4: 21192189-21194792 Arabidopsis lyrata
AL4G42030 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 21194293-21194792 Arabidopsis lyrata
AL4G42030 0.5kb downstream 0.5kb downstream 2604   true scaffold_4: 21191689-21194292 Arabidopsis lyrata
AL4G42030 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 21191689-21192188 Arabidopsis lyrata
AL4G42030 1.0kb upstream 1.0kb upstream 3104   true scaffold_4: 21192189-21195292 Arabidopsis lyrata
AL4G42030 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 21194293-21195292 Arabidopsis lyrata
AL4G42030 1.0kb downstream 1.0kb downstream 3104   true scaffold_4: 21191189-21194292 Arabidopsis lyrata
AL4G42030 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 21191189-21192188 Arabidopsis lyrata
AL4G42030 2.0kb upstream 2.0kb upstream 4104   true scaffold_4: 21192189-21196292 Arabidopsis lyrata
AL4G42030 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 21194293-21196292 Arabidopsis lyrata
AL4G42030 2.0kb downstream 2.0kb downstream 4104   true scaffold_4: 21190189-21194292 Arabidopsis lyrata
AL4G42030 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 21190189-21192188 Arabidopsis lyrata
AL4G42030 5.0kb upstream 5.0kb upstream 7104   true scaffold_4: 21192189-21199292 Arabidopsis lyrata
AL4G42030 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 21194293-21199292 Arabidopsis lyrata
AL4G42030 5.0kb downstream 5.0kb downstream 7104   true scaffold_4: 21187189-21194292 Arabidopsis lyrata
AL4G42030 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 21187189-21192188 Arabidopsis lyrata
AL4G42030 10.0kb upstream 10.0kb upstream 12104   true scaffold_4: 21192189-21204292 Arabidopsis lyrata
AL4G42030 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 21194293-21204292 Arabidopsis lyrata
AL4G42030 10.0kb downstream 10.0kb downstream 12104   true scaffold_4: 21182189-21194292 Arabidopsis lyrata
AL4G42030 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 21182189-21192188 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361167 5261 Brassicaceae View MSA
123839339 5264 Brassicales-Malvales View MSA
124341945 5266 SBM View MSA
124254095 5268 Malvidae View MSA
124060403 5270 Rosid View MSA
123752336 5271 Pentapetalae View MSA
122792727 5272 Eudicot View MSA
122049273 5273 Angiosperm View MSA
121349724 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain