Gene : AL4G46390 A. lyrata v2.1

Defline:  (1 of 1) PTHR13832:SF301 - PROTEIN PHOSPHATASE 2C 32 Genomic Order:  3296
Name:  ? AL4G46390 Secondary Identifier:  ? PAC:35923756

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL4G46390 0.5kb upstream 0.5kb upstream 4377   true scaffold_4: 22817949-22822325 Arabidopsis lyrata
AL4G46390 0.5kb upstream 0.5kb upstream 500   false scaffold_4: 22821826-22822325 Arabidopsis lyrata
AL4G46390 0.5kb downstream 0.5kb downstream 4377   true scaffold_4: 22817449-22821825 Arabidopsis lyrata
AL4G46390 0.5kb downstream 0.5kb downstream 500   false scaffold_4: 22817449-22817948 Arabidopsis lyrata
AL4G46390 1.0kb upstream 1.0kb upstream 4877   true scaffold_4: 22817949-22822825 Arabidopsis lyrata
AL4G46390 1.0kb upstream 1.0kb upstream 1000   false scaffold_4: 22821826-22822825 Arabidopsis lyrata
AL4G46390 1.0kb downstream 1.0kb downstream 4877   true scaffold_4: 22816949-22821825 Arabidopsis lyrata
AL4G46390 1.0kb downstream 1.0kb downstream 1000   false scaffold_4: 22816949-22817948 Arabidopsis lyrata
AL4G46390 2.0kb upstream 2.0kb upstream 5877   true scaffold_4: 22817949-22823825 Arabidopsis lyrata
AL4G46390 2.0kb upstream 2.0kb upstream 2000   false scaffold_4: 22821826-22823825 Arabidopsis lyrata
AL4G46390 2.0kb downstream 2.0kb downstream 5877   true scaffold_4: 22815949-22821825 Arabidopsis lyrata
AL4G46390 2.0kb downstream 2.0kb downstream 2000   false scaffold_4: 22815949-22817948 Arabidopsis lyrata
AL4G46390 5.0kb upstream 5.0kb upstream 8877   true scaffold_4: 22817949-22826825 Arabidopsis lyrata
AL4G46390 5.0kb upstream 5.0kb upstream 5000   false scaffold_4: 22821826-22826825 Arabidopsis lyrata
AL4G46390 5.0kb downstream 5.0kb downstream 8877   true scaffold_4: 22812949-22821825 Arabidopsis lyrata
AL4G46390 5.0kb downstream 5.0kb downstream 5000   false scaffold_4: 22812949-22817948 Arabidopsis lyrata
AL4G46390 10.0kb upstream 10.0kb upstream 13877   true scaffold_4: 22817949-22831825 Arabidopsis lyrata
AL4G46390 10.0kb upstream 10.0kb upstream 10000   false scaffold_4: 22821826-22831825 Arabidopsis lyrata
AL4G46390 10.0kb downstream 10.0kb downstream 13877   true scaffold_4: 22807949-22821825 Arabidopsis lyrata
AL4G46390 10.0kb downstream 10.0kb downstream 10000   false scaffold_4: 22807949-22817948 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122796170 5272 Eudicot View MSA
122362435 5261 Brassicaceae View MSA
123831296 5264 Brassicales-Malvales View MSA
124345203 5266 SBM View MSA
124240064 5268 Malvidae View MSA
124067755 5270 Rosid View MSA
123739663 5271 Pentapetalae View MSA
122050324 5273 Angiosperm View MSA
121349190 5274 Embryophyte View MSA
123381206 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain