Gene : AL5G10990 A. lyrata v2.1

Defline:  (1 of 5) PTHR10161 - TARTRATE-RESISTANT ACID PHOSPHATASE TYPE 5 Genomic Order:  91
Name:  ? AL5G10990 Secondary Identifier:  ? PAC:35919690

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5083 Arabidopsis lyrata pathologic  
Alyrata PWY-6348 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G10990 0.5kb upstream 0.5kb upstream 4640   true scaffold_5: 497121-501760 Arabidopsis lyrata
AL5G10990 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 501261-501760 Arabidopsis lyrata
AL5G10990 0.5kb downstream 0.5kb downstream 4640   true scaffold_5: 496621-501260 Arabidopsis lyrata
AL5G10990 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 496621-497120 Arabidopsis lyrata
AL5G10990 1.0kb upstream 1.0kb upstream 5140   true scaffold_5: 497121-502260 Arabidopsis lyrata
AL5G10990 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 501261-502260 Arabidopsis lyrata
AL5G10990 1.0kb downstream 1.0kb downstream 5140   true scaffold_5: 496121-501260 Arabidopsis lyrata
AL5G10990 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 496121-497120 Arabidopsis lyrata
AL5G10990 2.0kb upstream 2.0kb upstream 6140   true scaffold_5: 497121-503260 Arabidopsis lyrata
AL5G10990 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 501261-503260 Arabidopsis lyrata
AL5G10990 2.0kb downstream 2.0kb downstream 6140   true scaffold_5: 495121-501260 Arabidopsis lyrata
AL5G10990 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 495121-497120 Arabidopsis lyrata
AL5G10990 5.0kb upstream 5.0kb upstream 9140   true scaffold_5: 497121-506260 Arabidopsis lyrata
AL5G10990 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 501261-506260 Arabidopsis lyrata
AL5G10990 5.0kb downstream 5.0kb downstream 9140   true scaffold_5: 492121-501260 Arabidopsis lyrata
AL5G10990 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 492121-497120 Arabidopsis lyrata
AL5G10990 10.0kb upstream 10.0kb upstream 14140   true scaffold_5: 497121-511260 Arabidopsis lyrata
AL5G10990 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 501261-511260 Arabidopsis lyrata
AL5G10990 10.0kb downstream 10.0kb downstream 14140   true scaffold_5: 487121-501260 Arabidopsis lyrata
AL5G10990 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 487121-497120 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372081 5261 Brassicaceae View MSA
123800289 5264 Brassicales-Malvales View MSA
124344138 5266 SBM View MSA
124248897 5268 Malvidae View MSA
124061132 5270 Rosid View MSA
123743122 5271 Pentapetalae View MSA
122795933 5272 Eudicot View MSA
122045102 5273 Angiosperm View MSA
121351076 5274 Embryophyte View MSA
123427142 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain