Gene : AL5G13260 A. lyrata v2.1

Defline:  (1 of 1) PTHR31003//PTHR31003:SF3 - MYB FAMILY TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Genomic Order:  285
Name:  ? AL5G13260 Secondary Identifier:  ? PAC:35918717

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G13260 0.5kb upstream 0.5kb upstream 3402   true scaffold_5: 1875805-1879206 Arabidopsis lyrata
AL5G13260 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 1875805-1876304 Arabidopsis lyrata
AL5G13260 0.5kb downstream 0.5kb downstream 3402   true scaffold_5: 1876305-1879706 Arabidopsis lyrata
AL5G13260 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 1879207-1879706 Arabidopsis lyrata
AL5G13260 1.0kb upstream 1.0kb upstream 3902   true scaffold_5: 1875305-1879206 Arabidopsis lyrata
AL5G13260 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 1875305-1876304 Arabidopsis lyrata
AL5G13260 1.0kb downstream 1.0kb downstream 3902   true scaffold_5: 1876305-1880206 Arabidopsis lyrata
AL5G13260 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 1879207-1880206 Arabidopsis lyrata
AL5G13260 2.0kb upstream 2.0kb upstream 4902   true scaffold_5: 1874305-1879206 Arabidopsis lyrata
AL5G13260 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 1874305-1876304 Arabidopsis lyrata
AL5G13260 2.0kb downstream 2.0kb downstream 4902   true scaffold_5: 1876305-1881206 Arabidopsis lyrata
AL5G13260 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 1879207-1881206 Arabidopsis lyrata
AL5G13260 5.0kb upstream 5.0kb upstream 7902   true scaffold_5: 1871305-1879206 Arabidopsis lyrata
AL5G13260 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 1871305-1876304 Arabidopsis lyrata
AL5G13260 5.0kb downstream 5.0kb downstream 7902   true scaffold_5: 1876305-1884206 Arabidopsis lyrata
AL5G13260 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 1879207-1884206 Arabidopsis lyrata
AL5G13260 10.0kb upstream 10.0kb upstream 12902   true scaffold_5: 1866305-1879206 Arabidopsis lyrata
AL5G13260 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 1866305-1876304 Arabidopsis lyrata
AL5G13260 10.0kb downstream 10.0kb downstream 12902   true scaffold_5: 1876305-1889206 Arabidopsis lyrata
AL5G13260 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 1879207-1889206 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378591 5261 Brassicaceae View MSA
123839715 5264 Brassicales-Malvales View MSA
124346876 5266 SBM View MSA
124246486 5268 Malvidae View MSA
124069300 5270 Rosid View MSA
123741348 5271 Pentapetalae View MSA
122789527 5272 Eudicot View MSA
122049766 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain