Gene : AL5G11180 A. lyrata v2.1

Genomic Order:  108 Name:  ? AL5G11180
Secondary Identifier:  ? PAC:35919271

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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G11180 0.5kb upstream 0.5kb upstream 2225   true scaffold_5: 620978-623202 Arabidopsis lyrata
AL5G11180 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 622703-623202 Arabidopsis lyrata
AL5G11180 0.5kb downstream 0.5kb downstream 2225   true scaffold_5: 620478-622702 Arabidopsis lyrata
AL5G11180 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 620478-620977 Arabidopsis lyrata
AL5G11180 1.0kb upstream 1.0kb upstream 2725   true scaffold_5: 620978-623702 Arabidopsis lyrata
AL5G11180 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 622703-623702 Arabidopsis lyrata
AL5G11180 1.0kb downstream 1.0kb downstream 2725   true scaffold_5: 619978-622702 Arabidopsis lyrata
AL5G11180 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 619978-620977 Arabidopsis lyrata
AL5G11180 2.0kb upstream 2.0kb upstream 3725   true scaffold_5: 620978-624702 Arabidopsis lyrata
AL5G11180 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 622703-624702 Arabidopsis lyrata
AL5G11180 2.0kb downstream 2.0kb downstream 3725   true scaffold_5: 618978-622702 Arabidopsis lyrata
AL5G11180 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 618978-620977 Arabidopsis lyrata
AL5G11180 5.0kb upstream 5.0kb upstream 6725   true scaffold_5: 620978-627702 Arabidopsis lyrata
AL5G11180 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 622703-627702 Arabidopsis lyrata
AL5G11180 5.0kb downstream 5.0kb downstream 6725   true scaffold_5: 615978-622702 Arabidopsis lyrata
AL5G11180 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 615978-620977 Arabidopsis lyrata
AL5G11180 10.0kb upstream 10.0kb upstream 11725   true scaffold_5: 620978-632702 Arabidopsis lyrata
AL5G11180 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 622703-632702 Arabidopsis lyrata
AL5G11180 10.0kb downstream 10.0kb downstream 11725   true scaffold_5: 610978-622702 Arabidopsis lyrata
AL5G11180 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 610978-620977 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363252 5261 Brassicaceae View MSA
123829558 5264 Brassicales-Malvales View MSA
124340290 5266 SBM View MSA
124242449 5268 Malvidae View MSA
124069891 5270 Rosid View MSA
123747205 5271 Pentapetalae View MSA
122796968 5272 Eudicot View MSA
122050817 5273 Angiosperm View MSA
121348278 5274 Embryophyte View MSA
123380804 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain