Gene : AL5G16820 A. lyrata v2.1
Defline:  (1 of 168) PTHR31790:SF10 - F-BOX ASSOCIATED UBIQUITINATION EFFECTOR FAMILY PROTEIN-RELATED Genomic Order:  600
Name:  ? AL5G16820 Secondary Identifier:  ? PAC:35920976
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G16820 0.5kb upstream 0.5kb upstream 5366   true scaffold_5: 3766218-3771583 Arabidopsis lyrata
AL5G16820 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 3771084-3771583 Arabidopsis lyrata
AL5G16820 0.5kb downstream 0.5kb downstream 5366   true scaffold_5: 3765718-3771083 Arabidopsis lyrata
AL5G16820 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 3765718-3766217 Arabidopsis lyrata
AL5G16820 1.0kb upstream 1.0kb upstream 5866   true scaffold_5: 3766218-3772083 Arabidopsis lyrata
AL5G16820 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 3771084-3772083 Arabidopsis lyrata
AL5G16820 1.0kb downstream 1.0kb downstream 5866   true scaffold_5: 3765218-3771083 Arabidopsis lyrata
AL5G16820 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 3765218-3766217 Arabidopsis lyrata
AL5G16820 2.0kb upstream 2.0kb upstream 6866   true scaffold_5: 3766218-3773083 Arabidopsis lyrata
AL5G16820 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 3771084-3773083 Arabidopsis lyrata
AL5G16820 2.0kb downstream 2.0kb downstream 6866   true scaffold_5: 3764218-3771083 Arabidopsis lyrata
AL5G16820 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 3764218-3766217 Arabidopsis lyrata
AL5G16820 5.0kb upstream 5.0kb upstream 9866   true scaffold_5: 3766218-3776083 Arabidopsis lyrata
AL5G16820 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 3771084-3776083 Arabidopsis lyrata
AL5G16820 5.0kb downstream 5.0kb downstream 9866   true scaffold_5: 3761218-3771083 Arabidopsis lyrata
AL5G16820 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 3761218-3766217 Arabidopsis lyrata
AL5G16820 10.0kb upstream 10.0kb upstream 14866   true scaffold_5: 3766218-3781083 Arabidopsis lyrata
AL5G16820 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 3771084-3781083 Arabidopsis lyrata
AL5G16820 10.0kb downstream 10.0kb downstream 14866   true scaffold_5: 3756218-3771083 Arabidopsis lyrata
AL5G16820 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 3756218-3766217 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381584 5261 Brassicaceae View MSA
123803325 5264 Brassicales-Malvales View MSA
124300441 5266 SBM View MSA
124151628 5268 Malvidae View MSA
124074667 5270 Rosid View MSA
123753263 5271 Pentapetalae View MSA
122797953 5272 Eudicot View MSA
122051694 5273 Angiosperm View MSA
121351156 5274 Embryophyte View MSA
123382030 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain