Gene : AL5G15800 A. lyrata v2.1

Defline:  (1 of 7) PTHR22753:SF8 - ESTERASE/LIPASE/THIOESTERASE FAMILY PROTEIN-RELATED Genomic Order:  512
Name:  ? AL5G15800 Secondary Identifier:  ? PAC:35920431

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata TRIGLSYN-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G15800 0.5kb upstream 0.5kb upstream 4468   true scaffold_5: 3168689-3173156 Arabidopsis lyrata
AL5G15800 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 3168689-3169188 Arabidopsis lyrata
AL5G15800 0.5kb downstream 0.5kb downstream 4468   true scaffold_5: 3169189-3173656 Arabidopsis lyrata
AL5G15800 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 3173157-3173656 Arabidopsis lyrata
AL5G15800 1.0kb upstream 1.0kb upstream 4968   true scaffold_5: 3168189-3173156 Arabidopsis lyrata
AL5G15800 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 3168189-3169188 Arabidopsis lyrata
AL5G15800 1.0kb downstream 1.0kb downstream 4968   true scaffold_5: 3169189-3174156 Arabidopsis lyrata
AL5G15800 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 3173157-3174156 Arabidopsis lyrata
AL5G15800 2.0kb upstream 2.0kb upstream 5968   true scaffold_5: 3167189-3173156 Arabidopsis lyrata
AL5G15800 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 3167189-3169188 Arabidopsis lyrata
AL5G15800 2.0kb downstream 2.0kb downstream 5968   true scaffold_5: 3169189-3175156 Arabidopsis lyrata
AL5G15800 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 3173157-3175156 Arabidopsis lyrata
AL5G15800 5.0kb upstream 5.0kb upstream 8968   true scaffold_5: 3164189-3173156 Arabidopsis lyrata
AL5G15800 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 3164189-3169188 Arabidopsis lyrata
AL5G15800 5.0kb downstream 5.0kb downstream 8968   true scaffold_5: 3169189-3178156 Arabidopsis lyrata
AL5G15800 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 3173157-3178156 Arabidopsis lyrata
AL5G15800 10.0kb upstream 10.0kb upstream 13968   true scaffold_5: 3159189-3173156 Arabidopsis lyrata
AL5G15800 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 3159189-3169188 Arabidopsis lyrata
AL5G15800 10.0kb downstream 10.0kb downstream 13968   true scaffold_5: 3169189-3183156 Arabidopsis lyrata
AL5G15800 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 3173157-3183156 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380530 5261 Brassicaceae View MSA
123841244 5264 Brassicales-Malvales View MSA
124345197 5266 SBM View MSA
124241447 5268 Malvidae View MSA
124067934 5270 Rosid View MSA
123736438 5271 Pentapetalae View MSA
122797554 5272 Eudicot View MSA
122050475 5273 Angiosperm View MSA
121351319 5274 Embryophyte View MSA
123428333 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain