Gene : AL5G15630 A. lyrata v2.1

Defline:  (1 of 1) 1.1.1.331 - Secoisolariciresinol dehydrogenase Genomic Order:  502
Name:  ? AL5G15630 Secondary Identifier:  ? PAC:35918342

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5466 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G15630 0.5kb upstream 0.5kb upstream 1991   true scaffold_5: 3082392-3084382 Arabidopsis lyrata
AL5G15630 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 3082392-3082891 Arabidopsis lyrata
AL5G15630 0.5kb downstream 0.5kb downstream 1991   true scaffold_5: 3082892-3084882 Arabidopsis lyrata
AL5G15630 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 3084383-3084882 Arabidopsis lyrata
AL5G15630 1.0kb upstream 1.0kb upstream 2491   true scaffold_5: 3081892-3084382 Arabidopsis lyrata
AL5G15630 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 3081892-3082891 Arabidopsis lyrata
AL5G15630 1.0kb downstream 1.0kb downstream 2491   true scaffold_5: 3082892-3085382 Arabidopsis lyrata
AL5G15630 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 3084383-3085382 Arabidopsis lyrata
AL5G15630 2.0kb upstream 2.0kb upstream 3491   true scaffold_5: 3080892-3084382 Arabidopsis lyrata
AL5G15630 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 3080892-3082891 Arabidopsis lyrata
AL5G15630 2.0kb downstream 2.0kb downstream 3491   true scaffold_5: 3082892-3086382 Arabidopsis lyrata
AL5G15630 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 3084383-3086382 Arabidopsis lyrata
AL5G15630 5.0kb upstream 5.0kb upstream 6491   true scaffold_5: 3077892-3084382 Arabidopsis lyrata
AL5G15630 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 3077892-3082891 Arabidopsis lyrata
AL5G15630 5.0kb downstream 5.0kb downstream 6491   true scaffold_5: 3082892-3089382 Arabidopsis lyrata
AL5G15630 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 3084383-3089382 Arabidopsis lyrata
AL5G15630 10.0kb upstream 10.0kb upstream 11491   true scaffold_5: 3072892-3084382 Arabidopsis lyrata
AL5G15630 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 3072892-3082891 Arabidopsis lyrata
AL5G15630 10.0kb downstream 10.0kb downstream 11491   true scaffold_5: 3082892-3094382 Arabidopsis lyrata
AL5G15630 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 3084383-3094382 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369144 5261 Brassicaceae View MSA
123828735 5264 Brassicales-Malvales View MSA
124345380 5266 SBM View MSA
124247805 5268 Malvidae View MSA
124068499 5270 Rosid View MSA
123741629 5271 Pentapetalae View MSA
122790439 5272 Eudicot View MSA
122042361 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain