Gene : AL5G13940 A. lyrata v2.1

Defline:  (1 of 2) PTHR22952:SF110 - BZIP PROTEIN (ATBZIP48)-RELATED Genomic Order:  349
Name:  ? AL5G13940 Secondary Identifier:  ? PAC:35921004

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G13940 0.5kb upstream 0.5kb upstream 1255   true scaffold_5: 2203036-2204290 Arabidopsis lyrata
AL5G13940 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 2203036-2203535 Arabidopsis lyrata
AL5G13940 0.5kb downstream 0.5kb downstream 1255   true scaffold_5: 2203536-2204790 Arabidopsis lyrata
AL5G13940 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 2204291-2204790 Arabidopsis lyrata
AL5G13940 1.0kb upstream 1.0kb upstream 1755   true scaffold_5: 2202536-2204290 Arabidopsis lyrata
AL5G13940 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 2202536-2203535 Arabidopsis lyrata
AL5G13940 1.0kb downstream 1.0kb downstream 1755   true scaffold_5: 2203536-2205290 Arabidopsis lyrata
AL5G13940 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 2204291-2205290 Arabidopsis lyrata
AL5G13940 2.0kb upstream 2.0kb upstream 2755   true scaffold_5: 2201536-2204290 Arabidopsis lyrata
AL5G13940 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 2201536-2203535 Arabidopsis lyrata
AL5G13940 2.0kb downstream 2.0kb downstream 2755   true scaffold_5: 2203536-2206290 Arabidopsis lyrata
AL5G13940 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 2204291-2206290 Arabidopsis lyrata
AL5G13940 5.0kb upstream 5.0kb upstream 5755   true scaffold_5: 2198536-2204290 Arabidopsis lyrata
AL5G13940 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 2198536-2203535 Arabidopsis lyrata
AL5G13940 5.0kb downstream 5.0kb downstream 5755   true scaffold_5: 2203536-2209290 Arabidopsis lyrata
AL5G13940 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 2204291-2209290 Arabidopsis lyrata
AL5G13940 10.0kb upstream 10.0kb upstream 10755   true scaffold_5: 2193536-2204290 Arabidopsis lyrata
AL5G13940 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 2193536-2203535 Arabidopsis lyrata
AL5G13940 10.0kb downstream 10.0kb downstream 10755   true scaffold_5: 2203536-2214290 Arabidopsis lyrata
AL5G13940 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 2204291-2214290 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375478 5261 Brassicaceae View MSA
123840763 5264 Brassicales-Malvales View MSA
124338284 5266 SBM View MSA
124245537 5268 Malvidae View MSA
124069862 5270 Rosid View MSA
123747742 5271 Pentapetalae View MSA
122794625 5272 Eudicot View MSA
122049154 5273 Angiosperm View MSA
123428996 5275 Viridiplantae View MSA
121349851 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain