Gene : AL5G21010 A. lyrata v2.1

Defline:  (1 of 1) PTHR24322:SF510 - ALCOHOL DEHYDROGENASE (ATA1) Genomic Order:  933
Name:  ? AL5G21010 Secondary Identifier:  ? PAC:35919623

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-695 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G21010 0.5kb upstream 0.5kb upstream 1900   true scaffold_5: 9793387-9795286 Arabidopsis lyrata
AL5G21010 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 9793387-9793886 Arabidopsis lyrata
AL5G21010 0.5kb downstream 0.5kb downstream 1900   true scaffold_5: 9793887-9795786 Arabidopsis lyrata
AL5G21010 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 9795287-9795786 Arabidopsis lyrata
AL5G21010 1.0kb upstream 1.0kb upstream 2400   true scaffold_5: 9792887-9795286 Arabidopsis lyrata
AL5G21010 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 9792887-9793886 Arabidopsis lyrata
AL5G21010 1.0kb downstream 1.0kb downstream 2400   true scaffold_5: 9793887-9796286 Arabidopsis lyrata
AL5G21010 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 9795287-9796286 Arabidopsis lyrata
AL5G21010 2.0kb upstream 2.0kb upstream 3400   true scaffold_5: 9791887-9795286 Arabidopsis lyrata
AL5G21010 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 9791887-9793886 Arabidopsis lyrata
AL5G21010 2.0kb downstream 2.0kb downstream 3400   true scaffold_5: 9793887-9797286 Arabidopsis lyrata
AL5G21010 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 9795287-9797286 Arabidopsis lyrata
AL5G21010 5.0kb upstream 5.0kb upstream 6400   true scaffold_5: 9788887-9795286 Arabidopsis lyrata
AL5G21010 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 9788887-9793886 Arabidopsis lyrata
AL5G21010 5.0kb downstream 5.0kb downstream 6400   true scaffold_5: 9793887-9800286 Arabidopsis lyrata
AL5G21010 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 9795287-9800286 Arabidopsis lyrata
AL5G21010 10.0kb upstream 10.0kb upstream 11400   true scaffold_5: 9783887-9795286 Arabidopsis lyrata
AL5G21010 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 9783887-9793886 Arabidopsis lyrata
AL5G21010 10.0kb downstream 10.0kb downstream 11400   true scaffold_5: 9793887-9805286 Arabidopsis lyrata
AL5G21010 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 9795287-9805286 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371736 5261 Brassicaceae View MSA
123827401 5264 Brassicales-Malvales View MSA
124342614 5266 SBM View MSA
124239258 5268 Malvidae View MSA
124061755 5270 Rosid View MSA
123748267 5271 Pentapetalae View MSA
122788265 5272 Eudicot View MSA
122042997 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain