Gene : AL5G24200 A. lyrata v2.1

Defline:  (1 of 1) 3.1.27.9 - Transferred entry: 4.6.1.16 Genomic Order:  1204
Name:  ? AL5G24200 Secondary Identifier:  ? PAC:35921497

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6689 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G24200 0.5kb upstream 0.5kb upstream 1634   true scaffold_5: 12075106-12076739 Arabidopsis lyrata
AL5G24200 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 12075106-12075605 Arabidopsis lyrata
AL5G24200 0.5kb downstream 0.5kb downstream 1634   true scaffold_5: 12075606-12077239 Arabidopsis lyrata
AL5G24200 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 12076740-12077239 Arabidopsis lyrata
AL5G24200 1.0kb upstream 1.0kb upstream 2134   true scaffold_5: 12074606-12076739 Arabidopsis lyrata
AL5G24200 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 12074606-12075605 Arabidopsis lyrata
AL5G24200 1.0kb downstream 1.0kb downstream 2134   true scaffold_5: 12075606-12077739 Arabidopsis lyrata
AL5G24200 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 12076740-12077739 Arabidopsis lyrata
AL5G24200 2.0kb upstream 2.0kb upstream 3134   true scaffold_5: 12073606-12076739 Arabidopsis lyrata
AL5G24200 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 12073606-12075605 Arabidopsis lyrata
AL5G24200 2.0kb downstream 2.0kb downstream 3134   true scaffold_5: 12075606-12078739 Arabidopsis lyrata
AL5G24200 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 12076740-12078739 Arabidopsis lyrata
AL5G24200 5.0kb upstream 5.0kb upstream 6134   true scaffold_5: 12070606-12076739 Arabidopsis lyrata
AL5G24200 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 12070606-12075605 Arabidopsis lyrata
AL5G24200 5.0kb downstream 5.0kb downstream 6134   true scaffold_5: 12075606-12081739 Arabidopsis lyrata
AL5G24200 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 12076740-12081739 Arabidopsis lyrata
AL5G24200 10.0kb upstream 10.0kb upstream 11134   true scaffold_5: 12065606-12076739 Arabidopsis lyrata
AL5G24200 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 12065606-12075605 Arabidopsis lyrata
AL5G24200 10.0kb downstream 10.0kb downstream 11134   true scaffold_5: 12075606-12086739 Arabidopsis lyrata
AL5G24200 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 12076740-12086739 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041240 5273 Angiosperm View MSA
122331998 5261 Brassicaceae View MSA
123773118 5264 Brassicales-Malvales View MSA
124346911 5266 SBM View MSA
124240586 5268 Malvidae View MSA
124064519 5270 Rosid View MSA
123739625 5271 Pentapetalae View MSA
122788641 5272 Eudicot View MSA
123429143 5275 Viridiplantae View MSA
121344093 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain