Gene : AL5G27890 A. lyrata v2.1

Defline:  (1 of 9) PTHR12606 - SENTRIN/SUMO-SPECIFIC PROTEASE Genomic Order:  1542
Name:  ? AL5G27890 Secondary Identifier:  ? PAC:35921013

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G27890 0.5kb upstream 0.5kb upstream 2626   true scaffold_5: 13829785-13832410 Arabidopsis lyrata
AL5G27890 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 13831911-13832410 Arabidopsis lyrata
AL5G27890 0.5kb downstream 0.5kb downstream 2626   true scaffold_5: 13829285-13831910 Arabidopsis lyrata
AL5G27890 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 13829285-13829784 Arabidopsis lyrata
AL5G27890 1.0kb upstream 1.0kb upstream 3126   true scaffold_5: 13829785-13832910 Arabidopsis lyrata
AL5G27890 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 13831911-13832910 Arabidopsis lyrata
AL5G27890 1.0kb downstream 1.0kb downstream 3126   true scaffold_5: 13828785-13831910 Arabidopsis lyrata
AL5G27890 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 13828785-13829784 Arabidopsis lyrata
AL5G27890 2.0kb upstream 2.0kb upstream 4126   true scaffold_5: 13829785-13833910 Arabidopsis lyrata
AL5G27890 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 13831911-13833910 Arabidopsis lyrata
AL5G27890 2.0kb downstream 2.0kb downstream 4126   true scaffold_5: 13827785-13831910 Arabidopsis lyrata
AL5G27890 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 13827785-13829784 Arabidopsis lyrata
AL5G27890 5.0kb upstream 5.0kb upstream 7126   true scaffold_5: 13829785-13836910 Arabidopsis lyrata
AL5G27890 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 13831911-13836910 Arabidopsis lyrata
AL5G27890 5.0kb downstream 5.0kb downstream 7126   true scaffold_5: 13824785-13831910 Arabidopsis lyrata
AL5G27890 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 13824785-13829784 Arabidopsis lyrata
AL5G27890 10.0kb upstream 10.0kb upstream 12126   true scaffold_5: 13829785-13841910 Arabidopsis lyrata
AL5G27890 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 13831911-13841910 Arabidopsis lyrata
AL5G27890 10.0kb downstream 10.0kb downstream 12126   true scaffold_5: 13819785-13831910 Arabidopsis lyrata
AL5G27890 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 13819785-13829784 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122322663 5261 Brassicaceae Singleton cluster - no MSA
123764248 5264 Brassicales-Malvales Singleton cluster - no MSA
124262882 5266 SBM Singleton cluster - no MSA
124243986 5268 Malvidae View MSA
124074830 5270 Rosid View MSA
123753730 5271 Pentapetalae View MSA
122794426 5272 Eudicot View MSA
122049176 5273 Angiosperm View MSA
123429184 5275 Viridiplantae View MSA
121311282 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain