Gene : AL5G28120 A. lyrata v2.1

Defline:  (1 of 2) PTHR23024:SF157 - CARBOXYLESTERASE 12-RELATED Genomic Order:  1564
Name:  ? AL5G28120 Secondary Identifier:  ? PAC:35919280

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6303 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G28120 0.5kb upstream 0.5kb upstream 1615   true scaffold_5: 13910156-13911770 Arabidopsis lyrata
AL5G28120 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 13911271-13911770 Arabidopsis lyrata
AL5G28120 0.5kb downstream 0.5kb downstream 1615   true scaffold_5: 13909656-13911270 Arabidopsis lyrata
AL5G28120 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 13909656-13910155 Arabidopsis lyrata
AL5G28120 1.0kb upstream 1.0kb upstream 2115   true scaffold_5: 13910156-13912270 Arabidopsis lyrata
AL5G28120 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 13911271-13912270 Arabidopsis lyrata
AL5G28120 1.0kb downstream 1.0kb downstream 2115   true scaffold_5: 13909156-13911270 Arabidopsis lyrata
AL5G28120 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 13909156-13910155 Arabidopsis lyrata
AL5G28120 2.0kb upstream 2.0kb upstream 3115   true scaffold_5: 13910156-13913270 Arabidopsis lyrata
AL5G28120 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 13911271-13913270 Arabidopsis lyrata
AL5G28120 2.0kb downstream 2.0kb downstream 3115   true scaffold_5: 13908156-13911270 Arabidopsis lyrata
AL5G28120 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 13908156-13910155 Arabidopsis lyrata
AL5G28120 5.0kb upstream 5.0kb upstream 6115   true scaffold_5: 13910156-13916270 Arabidopsis lyrata
AL5G28120 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 13911271-13916270 Arabidopsis lyrata
AL5G28120 5.0kb downstream 5.0kb downstream 6115   true scaffold_5: 13905156-13911270 Arabidopsis lyrata
AL5G28120 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 13905156-13910155 Arabidopsis lyrata
AL5G28120 10.0kb upstream 10.0kb upstream 11115   true scaffold_5: 13910156-13921270 Arabidopsis lyrata
AL5G28120 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 13911271-13921270 Arabidopsis lyrata
AL5G28120 10.0kb downstream 10.0kb downstream 11115   true scaffold_5: 13900156-13911270 Arabidopsis lyrata
AL5G28120 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 13900156-13910155 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375372 5261 Brassicaceae View MSA
123837264 5264 Brassicales-Malvales View MSA
124322277 5266 SBM View MSA
124252668 5268 Malvidae View MSA
124074680 5270 Rosid View MSA
123751829 5271 Pentapetalae View MSA
122797555 5272 Eudicot View MSA
122051062 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350136 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain