Gene : AL5G27090 A. lyrata v2.1

Defline:  (1 of 1) PTHR10091:SF3 - ALDOSE 1-EPIMERASE Genomic Order:  1466
Name:  ? AL5G27090 Secondary Identifier:  ? PAC:35920509

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY66-422 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G27090 0.5kb upstream 0.5kb upstream 2755   true scaffold_5: 13467504-13470258 Arabidopsis lyrata
AL5G27090 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 13467504-13468003 Arabidopsis lyrata
AL5G27090 0.5kb downstream 0.5kb downstream 2755   true scaffold_5: 13468004-13470758 Arabidopsis lyrata
AL5G27090 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 13470259-13470758 Arabidopsis lyrata
AL5G27090 1.0kb upstream 1.0kb upstream 3255   true scaffold_5: 13467004-13470258 Arabidopsis lyrata
AL5G27090 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 13467004-13468003 Arabidopsis lyrata
AL5G27090 1.0kb downstream 1.0kb downstream 3255   true scaffold_5: 13468004-13471258 Arabidopsis lyrata
AL5G27090 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 13470259-13471258 Arabidopsis lyrata
AL5G27090 2.0kb upstream 2.0kb upstream 4255   true scaffold_5: 13466004-13470258 Arabidopsis lyrata
AL5G27090 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 13466004-13468003 Arabidopsis lyrata
AL5G27090 2.0kb downstream 2.0kb downstream 4255   true scaffold_5: 13468004-13472258 Arabidopsis lyrata
AL5G27090 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 13470259-13472258 Arabidopsis lyrata
AL5G27090 5.0kb upstream 5.0kb upstream 7255   true scaffold_5: 13463004-13470258 Arabidopsis lyrata
AL5G27090 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 13463004-13468003 Arabidopsis lyrata
AL5G27090 5.0kb downstream 5.0kb downstream 7255   true scaffold_5: 13468004-13475258 Arabidopsis lyrata
AL5G27090 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 13470259-13475258 Arabidopsis lyrata
AL5G27090 10.0kb upstream 10.0kb upstream 12255   true scaffold_5: 13458004-13470258 Arabidopsis lyrata
AL5G27090 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 13458004-13468003 Arabidopsis lyrata
AL5G27090 10.0kb downstream 10.0kb downstream 12255   true scaffold_5: 13468004-13480258 Arabidopsis lyrata
AL5G27090 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 13470259-13480258 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365500 5261 Brassicaceae View MSA
123830104 5264 Brassicales-Malvales View MSA
124340129 5266 SBM View MSA
124241568 5268 Malvidae View MSA
124062867 5270 Rosid View MSA
123744295 5271 Pentapetalae View MSA
122796241 5272 Eudicot View MSA
122044460 5273 Angiosperm View MSA
121310296 5274 Embryophyte View MSA
123425845 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain