Gene : AL5G26750 A. lyrata v2.1

Defline:  (1 of 1) PTHR11540:SF14 - MALATE DEHYDROGENASE, CHLOROPLASTIC Genomic Order:  1435
Name:  ? AL5G26750 Secondary Identifier:  ? PAC:35919075

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata GLUCONEO-PWY Arabidopsis lyrata pathologic  
Alyrata GLYOXYLATE-BYPASS Arabidopsis lyrata pathologic  
Alyrata PWY-5464 Arabidopsis lyrata pathologic  
Alyrata PWY-561 Arabidopsis lyrata pathologic  
Alyrata PWY-5690 Arabidopsis lyrata pathologic  
Alyrata PWY66-399 Arabidopsis lyrata pathologic  
Alyrata PWY-7115 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G26750 0.5kb upstream 0.5kb upstream 2232   true scaffold_5: 13247913-13250144 Arabidopsis lyrata
AL5G26750 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 13247913-13248412 Arabidopsis lyrata
AL5G26750 0.5kb downstream 0.5kb downstream 2232   true scaffold_5: 13248413-13250644 Arabidopsis lyrata
AL5G26750 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 13250145-13250644 Arabidopsis lyrata
AL5G26750 1.0kb upstream 1.0kb upstream 2732   true scaffold_5: 13247413-13250144 Arabidopsis lyrata
AL5G26750 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 13247413-13248412 Arabidopsis lyrata
AL5G26750 1.0kb downstream 1.0kb downstream 2732   true scaffold_5: 13248413-13251144 Arabidopsis lyrata
AL5G26750 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 13250145-13251144 Arabidopsis lyrata
AL5G26750 2.0kb upstream 2.0kb upstream 3732   true scaffold_5: 13246413-13250144 Arabidopsis lyrata
AL5G26750 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 13246413-13248412 Arabidopsis lyrata
AL5G26750 2.0kb downstream 2.0kb downstream 3732   true scaffold_5: 13248413-13252144 Arabidopsis lyrata
AL5G26750 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 13250145-13252144 Arabidopsis lyrata
AL5G26750 5.0kb upstream 5.0kb upstream 6732   true scaffold_5: 13243413-13250144 Arabidopsis lyrata
AL5G26750 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 13243413-13248412 Arabidopsis lyrata
AL5G26750 5.0kb downstream 5.0kb downstream 6732   true scaffold_5: 13248413-13255144 Arabidopsis lyrata
AL5G26750 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 13250145-13255144 Arabidopsis lyrata
AL5G26750 10.0kb upstream 10.0kb upstream 11732   true scaffold_5: 13238413-13250144 Arabidopsis lyrata
AL5G26750 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 13238413-13248412 Arabidopsis lyrata
AL5G26750 10.0kb downstream 10.0kb downstream 11732   true scaffold_5: 13248413-13260144 Arabidopsis lyrata
AL5G26750 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 13250145-13260144 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367755 5261 Brassicaceae View MSA
123838139 5264 Brassicales-Malvales View MSA
124343979 5266 SBM View MSA
124242231 5268 Malvidae View MSA
124067628 5270 Rosid View MSA
123748297 5271 Pentapetalae View MSA
122785823 5272 Eudicot View MSA
122049358 5273 Angiosperm View MSA
121344647 5274 Embryophyte View MSA
123426123 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain