Gene : AL5G26930 A. lyrata v2.1

Defline:  (1 of 1) PTHR23042:SF51 - TRANSCRIPTION FACTOR BHLH47 Genomic Order:  1451
Name:  ? AL5G26930 Secondary Identifier:  ? PAC:35918845

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G26930 0.5kb upstream 0.5kb upstream 2215   true scaffold_5: 13390874-13393088 Arabidopsis lyrata
AL5G26930 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 13390874-13391373 Arabidopsis lyrata
AL5G26930 0.5kb downstream 0.5kb downstream 2215   true scaffold_5: 13391374-13393588 Arabidopsis lyrata
AL5G26930 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 13393089-13393588 Arabidopsis lyrata
AL5G26930 1.0kb upstream 1.0kb upstream 2715   true scaffold_5: 13390374-13393088 Arabidopsis lyrata
AL5G26930 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 13390374-13391373 Arabidopsis lyrata
AL5G26930 1.0kb downstream 1.0kb downstream 2715   true scaffold_5: 13391374-13394088 Arabidopsis lyrata
AL5G26930 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 13393089-13394088 Arabidopsis lyrata
AL5G26930 2.0kb upstream 2.0kb upstream 3715   true scaffold_5: 13389374-13393088 Arabidopsis lyrata
AL5G26930 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 13389374-13391373 Arabidopsis lyrata
AL5G26930 2.0kb downstream 2.0kb downstream 3715   true scaffold_5: 13391374-13395088 Arabidopsis lyrata
AL5G26930 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 13393089-13395088 Arabidopsis lyrata
AL5G26930 5.0kb upstream 5.0kb upstream 6715   true scaffold_5: 13386374-13393088 Arabidopsis lyrata
AL5G26930 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 13386374-13391373 Arabidopsis lyrata
AL5G26930 5.0kb downstream 5.0kb downstream 6715   true scaffold_5: 13391374-13398088 Arabidopsis lyrata
AL5G26930 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 13393089-13398088 Arabidopsis lyrata
AL5G26930 10.0kb upstream 10.0kb upstream 11715   true scaffold_5: 13381374-13393088 Arabidopsis lyrata
AL5G26930 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 13381374-13391373 Arabidopsis lyrata
AL5G26930 10.0kb downstream 10.0kb downstream 11715   true scaffold_5: 13391374-13403088 Arabidopsis lyrata
AL5G26930 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 13393089-13403088 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378387 5261 Brassicaceae View MSA
123831438 5264 Brassicales-Malvales View MSA
124338458 5266 SBM View MSA
124236941 5268 Malvidae View MSA
124071212 5270 Rosid View MSA
123743361 5271 Pentapetalae View MSA
122787264 5272 Eudicot View MSA
122043647 5273 Angiosperm View MSA
121351586 5274 Embryophyte View MSA
123427389 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain