Gene : AL5G29650 A. lyrata v2.1

Defline:  (1 of 4) PTHR11751:SF431 - 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 4-RELATED Genomic Order:  1707
Name:  ? AL5G29650 Secondary Identifier:  ? PAC:35921624

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata ETHYL-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-7270 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G29650 0.5kb upstream 0.5kb upstream 2346   true scaffold_5: 14703338-14705683 Arabidopsis lyrata
AL5G29650 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 14705184-14705683 Arabidopsis lyrata
AL5G29650 0.5kb downstream 0.5kb downstream 2346   true scaffold_5: 14702838-14705183 Arabidopsis lyrata
AL5G29650 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 14702838-14703337 Arabidopsis lyrata
AL5G29650 1.0kb upstream 1.0kb upstream 2846   true scaffold_5: 14703338-14706183 Arabidopsis lyrata
AL5G29650 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 14705184-14706183 Arabidopsis lyrata
AL5G29650 1.0kb downstream 1.0kb downstream 2846   true scaffold_5: 14702338-14705183 Arabidopsis lyrata
AL5G29650 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 14702338-14703337 Arabidopsis lyrata
AL5G29650 2.0kb upstream 2.0kb upstream 3846   true scaffold_5: 14703338-14707183 Arabidopsis lyrata
AL5G29650 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 14705184-14707183 Arabidopsis lyrata
AL5G29650 2.0kb downstream 2.0kb downstream 3846   true scaffold_5: 14701338-14705183 Arabidopsis lyrata
AL5G29650 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 14701338-14703337 Arabidopsis lyrata
AL5G29650 5.0kb upstream 5.0kb upstream 6846   true scaffold_5: 14703338-14710183 Arabidopsis lyrata
AL5G29650 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 14705184-14710183 Arabidopsis lyrata
AL5G29650 5.0kb downstream 5.0kb downstream 6846   true scaffold_5: 14698338-14705183 Arabidopsis lyrata
AL5G29650 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 14698338-14703337 Arabidopsis lyrata
AL5G29650 10.0kb upstream 10.0kb upstream 11846   true scaffold_5: 14703338-14715183 Arabidopsis lyrata
AL5G29650 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 14705184-14715183 Arabidopsis lyrata
AL5G29650 10.0kb downstream 10.0kb downstream 11846   true scaffold_5: 14693338-14705183 Arabidopsis lyrata
AL5G29650 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 14693338-14703337 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362882 5261 Brassicaceae View MSA
123798444 5264 Brassicales-Malvales View MSA
124296078 5266 SBM View MSA
124247956 5268 Malvidae View MSA
124066319 5270 Rosid View MSA
123745403 5271 Pentapetalae View MSA
122791160 5272 Eudicot View MSA
122042730 5273 Angiosperm View MSA
121351183 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain